RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 OLFML2BQ68BL8 750 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 UBE2Q1Q7Z7E8 422 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 DDX11Q96FC9 970 aa22.69■■□□□ 1.22
CTSA-217ENST00000607482 NMT2O60551 498 aa22.68■■□□□ 1.22
CTSA-217ENST00000607482 STAT2P52630 851 aa22.68■■□□□ 1.22
CTSA-217ENST00000607482 CCDC96Q2M329 555 aa22.68■■□□□ 1.22
CTSA-217ENST00000607482 DIS3LQ8TF46 1054 aaKnown RBP22.68■■□□□ 1.22
CTSA-217ENST00000607482 C11orf49Q9H6J7 331 aa22.68■■□□□ 1.22
CTSA-217ENST00000607482 OGDHLQ9ULD0 1010 aa22.68■■□□□ 1.22
CTSA-217ENST00000607482 MYH4Q9Y623 1939 aa22.67■■□□□ 1.22
CTSA-217ENST00000607482 ZMYM6O95789 1325 aa22.67■■□□□ 1.22
CTSA-217ENST00000607482 COBLO75128 1261 aa22.67■■□□□ 1.22
CTSA-217ENST00000607482 MYCNP04198 464 aaPredicted RBP22.67■■□□□ 1.22
CTSA-217ENST00000607482 PGK2P07205 417 aa22.67■■□□□ 1.22
CTSA-217ENST00000607482 PCP11498 1178 aaKnown RBP22.67■■□□□ 1.22
CTSA-217ENST00000607482 FAM160B2Q86V87 743 aa22.67■■□□□ 1.22
CTSA-217ENST00000607482 GMCL1Q96IK5 515 aa22.67■■□□□ 1.22
CTSA-217ENST00000607482 RAVER2Q9HCJ3 691 aaKnown RBP22.67■■□□□ 1.22
CTSA-217ENST00000607482 DDX20Q9UHI6 824 aaKnown RBP22.67■■□□□ 1.22
CTSA-217ENST00000607482 ZNF214Q9UL59 606 aaPredicted RBP22.67■■□□□ 1.22
CTSA-217ENST00000607482 GREB1LQ9C091 1923 aaPredicted RBP22.67■■□□□ 1.22
CTSA-217ENST00000607482 FDX1P10109 184 aa22.66■■□□□ 1.22
CTSA-217ENST00000607482 AKNAD1Q5T1N1 836 aa22.66■■□□□ 1.22
CTSA-217ENST00000607482 IL17RBQ9NRM6 502 aa22.66■■□□□ 1.22
CTSA-217ENST00000607482 CTNNA3Q9UI47 895 aa22.66■■□□□ 1.22
CTSA-217ENST00000607482 A0A0G2JMZ2 1700 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 RLFQ13129 1914 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 KCTD1Q719H9 257 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 ANKRD35Q8N283 1001 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 STAG1Q8WVM7 1258 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 ESR2Q92731 530 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 MAML3Q96JK9 1138 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 SLC38A10Q9HBR0 1119 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 HOMER2Q9NSB8 354 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 FBXO40Q9UH90 709 aa22.65■■□□□ 1.22
CTSA-217ENST00000607482 TOP1P11387 765 aaKnown RBP22.64■■□□□ 1.21
CTSA-217ENST00000607482 IMMTQ16891 758 aaKnown RBP22.64■■□□□ 1.21
CTSA-217ENST00000607482 TTC22Q5TAA0 569 aa22.64■■□□□ 1.21
CTSA-217ENST00000607482 RCSD1Q6JBY9 416 aa22.64■■□□□ 1.21
CTSA-217ENST00000607482 REPS2Q8NFH8 660 aa22.64■■□□□ 1.21
CTSA-217ENST00000607482 RUFY2Q8WXA3 655 aa22.64■■□□□ 1.21
CTSA-217ENST00000607482 FGRP09769 529 aa22.63■■□□□ 1.21
CTSA-217ENST00000607482 OAZ1P54368 228 aa22.63■■□□□ 1.21
CTSA-217ENST00000607482 LHX8Q68G74 356 aa22.63■■□□□ 1.21
CTSA-217ENST00000607482 ARRDC4Q8NCT1 418 aa22.63■■□□□ 1.21
CTSA-217ENST00000607482 CNPY2Q9Y2B0 182 aa22.63■■□□□ 1.21
CTSA-217ENST00000607482 ATP2A1O14983 1001 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 PDE4AP27815 886 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 PRAMEF19Q5SWL8 479 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 CCDC174Q6PII3 467 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 C7orf61Q8IZ16 206 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 CHST13Q8NET6 341 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 DCAF4Q8WV16 495 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 DIS3Q9Y2L1 958 aaKnown RBP22.62■■□□□ 1.21
CTSA-217ENST00000607482 RIPK3Q9Y572 518 aa22.62■■□□□ 1.21
CTSA-217ENST00000607482 COL11A1P12107 1806 aaPredicted RBP22.61■■□□□ 1.21
CTSA-217ENST00000607482 CYBAP13498 195 aa22.61■■□□□ 1.21
CTSA-217ENST00000607482 IQCA1Q86XH1 822 aa22.61■■□□□ 1.21
CTSA-217ENST00000607482 TINF2Q9BSI4 451 aa22.61■■□□□ 1.21
CTSA-217ENST00000607482 DSCC1Q9BVC3 393 aa22.61■■□□□ 1.21
CTSA-217ENST00000607482 TCP11L1Q9NUJ3 509 aa22.61■■□□□ 1.21
CTSA-217ENST00000607482 PARP14Q460N5 1801 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 ZNF236Q9UL36 1845 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 KBTBD13C9JR72 458 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 SEPT4O43236 478 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 ZNF792Q3KQV3 632 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 CCDC178Q5BJE1 867 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 ANO1Q5XXA6 986 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 CHRDL2Q6WN34 429 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 TBC1D10CQ8IV04 446 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 TRPV1Q8NER1 839 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 TTC14Q96N46 770 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 TMEM47Q9BQJ4 181 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 SENP6Q9GZR1 1112 aaPredicted RBP22.6■■□□□ 1.21
CTSA-217ENST00000607482 COLQQ9Y215 455 aaPredicted RBP22.6■■□□□ 1.21
CTSA-217ENST00000607482 TACC3Q9Y6A5 838 aa22.6■■□□□ 1.21
CTSA-217ENST00000607482 ALAS1P13196 640 aa22.59■■□□□ 1.21
CTSA-217ENST00000607482 NT5C2P49902 561 aa22.59■■□□□ 1.21
CTSA-217ENST00000607482 HABP4Q5JVS0 413 aaKnown RBP22.59■■□□□ 1.21
CTSA-217ENST00000607482 ZKSCAN3Q9BRR0 538 aa22.59■■□□□ 1.21
CTSA-217ENST00000607482 ACAD9Q9H845 621 aa22.59■■□□□ 1.21
CTSA-217ENST00000607482 GPCPD1Q9NPB8 672 aa22.59■■□□□ 1.21
CTSA-217ENST00000607482 NRBP1Q9UHY1 535 aa22.59■■□□□ 1.21
CTSA-217ENST00000607482 PLA2G6O60733 806 aa22.58■■□□□ 1.21
CTSA-217ENST00000607482 RARBP10826 455 aa22.58■■□□□ 1.21
CTSA-217ENST00000607482 AGBL1Q96MI9 1066 aa22.58■■□□□ 1.21
CTSA-217ENST00000607482 KRT23Q9C075 422 aa22.58■■□□□ 1.21
CTSA-217ENST00000607482 PRR12Q9ULL5 1215 aa22.58■■□□□ 1.21
CTSA-217ENST00000607482 FRMPD2Q68DX3 1309 aaPredicted RBP22.57■■□□□ 1.2
CTSA-217ENST00000607482 DNM1LO00429 736 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 KDM4AO75164 1064 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 GSPT1P15170 499 aaKnown RBP22.57■■□□□ 1.2
CTSA-217ENST00000607482 SNAP25P60880 206 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 TKFCQ3LXA3 575 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 GJC2Q5T442 439 aaPredicted RBP22.57■■□□□ 1.2
CTSA-217ENST00000607482 MSL3Q8N5Y2 521 aaKnown RBP22.57■■□□□ 1.2
CTSA-217ENST00000607482 TRERF1Q96PN7 1200 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 UBAC1Q9BSL1 405 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 CNNM2Q9H8M5 875 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 RNF146Q9NTX7 359 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms