RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 NKX3-2P78367 333 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 MRPS5P82675 430 aaKnown RBP18.05■□□□□ 0.48
SSBP4-214ENST00000607020 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
SSBP4-214ENST00000607020 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 TEX13BQ9BXU2 312 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
SSBP4-214ENST00000607020 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 THEGQ9P2T0 379 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 EXOC6BQ9Y2D4 811 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 USP17L12C9JPN9 530 aa18.04■□□□□ 0.48
SSBP4-214ENST00000607020 USP17L21D6R901 530 aa18.04■□□□□ 0.48
SSBP4-214ENST00000607020 GOLIM4O00461 696 aa18.04■□□□□ 0.48
SSBP4-214ENST00000607020 PRKAB2O43741 272 aa18.04■□□□□ 0.48
SSBP4-214ENST00000607020 CSF2RAP15509 400 aa18.04■□□□□ 0.48
SSBP4-214ENST00000607020 PSRC1Q6PGN9 363 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-214ENST00000607020 PRDM12Q9H4Q4 367 aa18.04■□□□□ 0.48
SSBP4-214ENST00000607020 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-214ENST00000607020 MYADML2A6NDP7 307 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 GRXCR1A8MXD5 290 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ASGR1P07306 291 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 RLBP1P12271 317 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ADD2P35612 726 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 GJA9P57773 515 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ACVR2BQ13705 512 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 RAB30Q15771 203 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 FAM83BQ5T0W9 1011 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 CCDC129Q6ZRS4 1044 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 FAM126BQ8IXS8 530 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
SSBP4-214ENST00000607020 HERVK_113Q902F9 699 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 DDX11Q96FC9 970 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 SLF1Q9BQI6 1058 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.03■□□□□ 0.48
SSBP4-214ENST00000607020 ABHD16BQ9H3Z7 469 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 SPC25Q9HBM1 224 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 IL1RAPL2Q9NP60 686 aa18.03■□□□□ 0.48
SSBP4-214ENST00000607020 MYO5AQ9Y4I1 1855 aaKnown RBP18.03■□□□□ 0.48
SSBP4-214ENST00000607020 SMIM22K7EJ46 135 aa18.02■□□□□ 0.48
SSBP4-214ENST00000607020 MBD4O95243 580 aa18.02■□□□□ 0.48
SSBP4-214ENST00000607020 CLASRPQ8N2M8 674 aaKnown RBP18.02■□□□□ 0.48
SSBP4-214ENST00000607020 PRPF38AQ8NAV1 312 aaKnown RBP18.02■□□□□ 0.48
SSBP4-214ENST00000607020 ADAMTS19Q8TE59 1207 aa18.02■□□□□ 0.48
SSBP4-214ENST00000607020 DNAJC2Q99543 621 aaKnown RBP18.02■□□□□ 0.48
SSBP4-214ENST00000607020 MSRAQ9UJ68 235 aa18.02■□□□□ 0.48
SSBP4-214ENST00000607020 ZHX1Q9UKY1 873 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-214ENST00000607020 RIPK3Q9Y572 518 aa18.02■□□□□ 0.48
SSBP4-214ENST00000607020 ZBED9Q6R2W3 1325 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 CYP2D7A0A087X1C5 515 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 CD4P01730 458 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 C6orf222P0C671 652 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-214ENST00000607020 SNRNP48Q6IEG0 339 aaKnown RBP18.01■□□□□ 0.47
SSBP4-214ENST00000607020 SLC43A3Q8NBI5 491 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 IL23AQ9NPF7 189 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-214ENST00000607020 NYAP2Q9P242 653 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
SSBP4-214ENST00000607020 CTAGE5O15320 804 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 TLR3O15455 904 aaKnown RBP18■□□□□ 0.47
SSBP4-214ENST00000607020 UBE3CQ15386 1083 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 CCDC144BQ3MJ40 725 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 GNASQ5JWF2 1037 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 CTR9Q6PD62 1173 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 VTI1AQ96AJ9 217 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 KIF1BPQ96EK5 621 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 DDRGK1Q96HY6 314 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 FGD4Q96M96 766 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 UHRF1Q96T88 793 aaPredicted RBP18■□□□□ 0.47
SSBP4-214ENST00000607020 SEZ6LQ9BYH1 1024 aa18■□□□□ 0.47
SSBP4-214ENST00000607020 MTIF3Q9H2K0 278 aaKnown RBP18■□□□□ 0.47
SSBP4-214ENST00000607020 NCOR1O75376 2440 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 F5H6K3 240 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 ADCY6O43306 1168 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 FGBP02675 491 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 ACRP10323 421 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-214ENST00000607020 KLRC3Q07444 240 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.476e-8■■■■■ 28.7
SSBP4-214ENST00000607020 PAG1Q9NWQ8 432 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 FBXO40Q9UH90 709 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 CHD9Q3L8U1 2897 aa17.99■□□□□ 0.47
SSBP4-214ENST00000607020 ZBED4O75132 1171 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 CABYRO75952 493 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 IFIT2P09913 472 aaKnown RBP17.98■□□□□ 0.47
SSBP4-214ENST00000607020 ATP5JP18859 108 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 PLA2G5P39877 138 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 CHST13Q8NET6 341 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 KATNBL1Q9H079 304 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 SLC28A3Q9HAS3 691 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
SSBP4-214ENST00000607020 CXXC1Q9P0U4 656 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-214ENST00000607020 NDUFB10O96000 172 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 IGFBP4P22692 258 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 CYP2C18P33260 490 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 OAZ1P54368 228 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms