RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MMP19Q99542 508 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 TEX13BQ9BXU2 312 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 FEM1BQ9UK73 627 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 MYH4Q9Y623 1939 aa15.85■□□□□ 0.13
CTSA-213ENST00000606782 DNM1LO00429 736 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 RAD21O60216 631 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 TSPY3P0CV98 308 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 TSPY8P0CW00 308 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 NOVP48745 357 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 TFAP4Q01664 338 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 KCTD2Q14681 263 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
CTSA-213ENST00000606782 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 ARRDC4Q8NCT1 418 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 SLC38A10Q9HBR0 1119 aa15.84■□□□□ 0.13
CTSA-213ENST00000606782 DNAJC25-GNG10A0A024R161 153 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 FDX1P10109 184 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 OAZ1P54368 228 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 FAM47AQ5JRC9 791 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 VPS53Q5VIR6 699 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 MSL3Q8N5Y2 521 aaKnown RBP15.83■□□□□ 0.12
CTSA-213ENST00000606782 GMCL1Q96IK5 515 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 TINF2Q9BSI4 451 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 ZMYND8Q9ULU4 1186 aaPredicted RBP15.83■□□□□ 0.12
CTSA-213ENST00000606782 RIPK3Q9Y572 518 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 SMCHD1A6NHR9 2005 aa15.83■□□□□ 0.12
CTSA-213ENST00000606782 ORC4O43929 436 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 PLA2G6O60733 806 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 ZBED4O75132 1171 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 PGK2P07205 417 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 BMP3P12645 472 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 MCMDC2Q4G0Z9 681 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 PRAMEF19Q5SWL8 479 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 SNRNP48Q6IEG0 339 aaKnown RBP15.82■□□□□ 0.12
CTSA-213ENST00000606782 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
CTSA-213ENST00000606782 SENP6Q9GZR1 1112 aaPredicted RBP15.82■□□□□ 0.12
CTSA-213ENST00000606782 IL17RBQ9NRM6 502 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 TACC3Q9Y6A5 838 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 ZMYM6O95789 1325 aa15.82■□□□□ 0.12
CTSA-213ENST00000606782 TTC22Q5TAA0 569 aa15.81■□□□□ 0.12
CTSA-213ENST00000606782 MAMDC4Q6UXC1 1216 aa15.81■□□□□ 0.12
CTSA-213ENST00000606782 KIFC2Q96AC6 838 aa15.81■□□□□ 0.12
CTSA-213ENST00000606782 FAM227BQ96M60 508 aa15.81■□□□□ 0.12
CTSA-213ENST00000606782 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 A0A0D9SFI3 127 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 FGAP02671 866 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 ZNF865P0CJ78 1059 aaPredicted RBP15.8■□□□□ 0.12
CTSA-213ENST00000606782 SYN1P17600 705 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
CTSA-213ENST00000606782 CTDSPL2Q05D32 466 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 SNX17Q15036 470 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 ZNF467Q7Z7K2 595 aaPredicted RBP15.8■□□□□ 0.12
CTSA-213ENST00000606782 FAM160B2Q86V87 743 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 CHST13Q8NET6 341 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 INCENPQ9NQS7 918 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 FBXO40Q9UH90 709 aa15.8■□□□□ 0.12
CTSA-213ENST00000606782 SZT2Q5T011 3432 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 SYNGAP1Q96PV0 1343 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 TSPY2A6NKD2 308 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
CTSA-213ENST00000606782 GSPT1P15170 499 aaKnown RBP15.79■□□□□ 0.12
CTSA-213ENST00000606782 STAT2P52630 851 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 LRRC41Q15345 812 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 GJC2Q5T442 439 aaPredicted RBP15.79■□□□□ 0.12
CTSA-213ENST00000606782 C1orf53Q5VUE5 145 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 CPXCR1Q8N123 301 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 STAG1Q8WVM7 1258 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 RAVER2Q9HCJ3 691 aaKnown RBP15.79■□□□□ 0.12
CTSA-213ENST00000606782 TCP11L1Q9NUJ3 509 aa15.79■□□□□ 0.12
CTSA-213ENST00000606782 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
CTSA-213ENST00000606782 SNAI1O95863 264 aaPredicted RBP15.78■□□□□ 0.12
CTSA-213ENST00000606782 TAL1P17542 331 aaPredicted RBP15.78■□□□□ 0.12
CTSA-213ENST00000606782 SLC1A4P43007 532 aa15.78■□□□□ 0.12
CTSA-213ENST00000606782 NMIQ13287 307 aaPredicted RBP15.78■□□□□ 0.12
CTSA-213ENST00000606782 RCSD1Q6JBY9 416 aa15.78■□□□□ 0.12
CTSA-213ENST00000606782 SLC39A5Q6ZMH5 540 aa15.78■□□□□ 0.12
CTSA-213ENST00000606782 DDX11Q96FC9 970 aa15.78■□□□□ 0.12
CTSA-213ENST00000606782 STX8Q9UNK0 236 aa15.78■□□□□ 0.12
CTSA-213ENST00000606782 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
CTSA-213ENST00000606782 ZNF536O15090 1300 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 CCDC171Q6TFL3 1326 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 NMT2O60551 498 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 RARBP10826 455 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 PCP11498 1178 aaKnown RBP15.77■□□□□ 0.12
CTSA-213ENST00000606782 AKR1A1P14550 325 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 SDSP20132 328 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 MCCP23508 829 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 ANO1Q5XXA6 986 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 GPR153Q6NV75 609 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 ZNF589Q86UQ0 364 aaPredicted RBP15.77■□□□□ 0.12
CTSA-213ENST00000606782 FGD4Q96M96 766 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 PHF24Q9UPV7 400 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.12
CTSA-213ENST00000606782 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms