RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ZBED4O75132 1171 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 ZKSCAN1P17029 563 aaPredicted RBP22.63■■□□□ 1.21
SRSF4-206ENST00000605204 ERCC3P19447 782 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 OAZ1P54368 228 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 TMEM132BQ14DG7 1078 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 CASC1Q6TDU7 716 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 KIAA1211Q6ZU35 1233 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 DGKHQ86XP1 1220 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 DCAF4Q8WV16 495 aa22.63■■□□□ 1.21
SRSF4-206ENST00000605204 ZNF214Q9UL59 606 aaPredicted RBP22.63■■□□□ 1.21
SRSF4-206ENST00000605204 CTDP1Q9Y5B0 961 aaPredicted RBP22.63■■□□□ 1.21
SRSF4-206ENST00000605204 GJB1P08034 283 aa22.62■■□□□ 1.21
SRSF4-206ENST00000605204 CYP2B6P20813 491 aa22.62■■□□□ 1.21
SRSF4-206ENST00000605204 STAT3P40763 770 aa22.62■■□□□ 1.21
SRSF4-206ENST00000605204 SAMD1Q6SPF0 538 aaPredicted RBP22.62■■□□□ 1.21
SRSF4-206ENST00000605204 REPS2Q8NFH8 660 aa22.62■■□□□ 1.21
SRSF4-206ENST00000605204 UNC93B1Q9H1C4 597 aa22.62■■□□□ 1.21
SRSF4-206ENST00000605204 LAMA3Q16787 3333 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 RLFQ13129 1914 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 GJA8P48165 433 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 TRDNQ13061 729 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 CHRDL2Q6WN34 429 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 NCAPG2Q86XI2 1143 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 RNF208Q9H0X6 261 aa22.61■■□□□ 1.21
SRSF4-206ENST00000605204 PLXNB2O15031 1838 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 FCER1AP12319 257 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 TRIB2Q92519 343 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 KIFC2Q96AC6 838 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 TMEM47Q9BQJ4 181 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 SLC38A10Q9HBR0 1119 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 ISY1Q9ULR0 285 aaKnown RBP22.6■■□□□ 1.21
SRSF4-206ENST00000605204 ZNF236Q9UL36 1845 aa22.6■■□□□ 1.21
SRSF4-206ENST00000605204 MYH4Q9Y623 1939 aa22.59■■□□□ 1.21
SRSF4-206ENST00000605204 TMEM232C9JQI7 657 aa22.59■■□□□ 1.21
SRSF4-206ENST00000605204 KDM4AO75164 1064 aa22.59■■□□□ 1.21
SRSF4-206ENST00000605204 MCCP23508 829 aa22.59■■□□□ 1.21
SRSF4-206ENST00000605204 IKQ13123 557 aaPredicted RBP22.59■■□□□ 1.21
SRSF4-206ENST00000605204 MAP4K1Q92918 833 aa22.59■■□□□ 1.21
SRSF4-206ENST00000605204 UBAC1Q9BSL1 405 aa22.59■■□□□ 1.21
SRSF4-206ENST00000605204 PAK6Q9NQU5 681 aaPredicted RBP22.59■■□□□ 1.21
SRSF4-206ENST00000605204 ADORA2AP29274 412 aa22.58■■□□□ 1.21
SRSF4-206ENST00000605204 MAP3K21Q5TCX8 1036 aa22.58■■□□□ 1.21
SRSF4-206ENST00000605204 DPP9Q86TI2 863 aa22.58■■□□□ 1.21
SRSF4-206ENST00000605204 ANKS1AQ92625 1134 aa22.58■■□□□ 1.21
SRSF4-206ENST00000605204 ESYT1Q9BSJ8 1104 aa22.58■■□□□ 1.21
SRSF4-206ENST00000605204 HMX1Q9NP08 348 aaPredicted RBP22.58■■□□□ 1.21
SRSF4-206ENST00000605204 FBXO40Q9UH90 709 aa22.58■■□□□ 1.21
SRSF4-206ENST00000605204 PARP14Q460N5 1801 aa22.58■■□□□ 1.2
SRSF4-206ENST00000605204 RPTORQ8N122 1335 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 B4E1Z4 1266 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 FARP2O94887 1054 aaPredicted RBP22.57■■□□□ 1.2
SRSF4-206ENST00000605204 PTH1RQ03431 593 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 KCTD2Q14681 263 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 CCDC96Q2M329 555 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 MFSD14CQ5VZR4 134 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 U2AF1L4Q8WU68 220 aaKnown RBP22.57■■□□□ 1.2
SRSF4-206ENST00000605204 ZSCAN10Q96SZ4 725 aaPredicted RBP22.57■■□□□ 1.2
SRSF4-206ENST00000605204 PNMA2Q9UL42 364 aa22.57■■□□□ 1.2
SRSF4-206ENST00000605204 GPATCH4Q5T3I0 446 aaKnown RBP22.56■■□□□ 1.2
SRSF4-206ENST00000605204 OLFML2BQ68BL8 750 aa22.56■■□□□ 1.2
SRSF4-206ENST00000605204 SNRNP48Q6IEG0 339 aaKnown RBP22.56■■□□□ 1.2
SRSF4-206ENST00000605204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.56■■□□□ 1.2
SRSF4-206ENST00000605204 RALYLQ86SE5 291 aaKnown RBP22.56■■□□□ 1.2
SRSF4-206ENST00000605204 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.56■■□□□ 1.24e-38■■□□□ 14.4
SRSF4-206ENST00000605204 PPP4R2Q9NY27 417 aa22.56■■□□□ 1.2
SRSF4-206ENST00000605204 CDC45O75419 566 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 CYP21A2P08686 494 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 PDHBP11177 359 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 BTNL9Q6UXG8 535 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 CHST13Q8NET6 341 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 MMP19Q99542 508 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 KAT14Q9H8E8 782 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 ZSWIM5Q9P217 1185 aa22.55■■□□□ 1.2
SRSF4-206ENST00000605204 RBM27Q9P2N5 1060 aaKnown RBP22.55■■□□□ 1.2
SRSF4-206ENST00000605204 SNHG28P0DPA3 235 aa22.54■■□□□ 1.2
SRSF4-206ENST00000605204 PRKAR2AP13861 404 aaKnown RBP22.54■■□□□ 1.2
SRSF4-206ENST00000605204 TKFCQ3LXA3 575 aa22.54■■□□□ 1.2
SRSF4-206ENST00000605204 KCTD1Q719H9 257 aa22.54■■□□□ 1.2
SRSF4-206ENST00000605204 DPF3Q92784 378 aa22.54■■□□□ 1.2
SRSF4-206ENST00000605204 DIS3Q9Y2L1 958 aaKnown RBP22.54■■□□□ 1.2
SRSF4-206ENST00000605204 RBM8AQ9Y5S9 174 aaKnown RBP22.54■■□□□ 1.2
SRSF4-206ENST00000605204 TNKSO95271 1327 aa22.54■■□□□ 1.2
SRSF4-206ENST00000605204 SGPL1O95470 568 aa22.53■■□□□ 1.2
SRSF4-206ENST00000605204 SART3Q15020 963 aaKnown RBP22.53■■□□□ 1.2
SRSF4-206ENST00000605204 CPXCR1Q8N123 301 aa22.53■■□□□ 1.2
SRSF4-206ENST00000605204 ENAHQ8N8S7 591 aaPredicted RBP22.53■■□□□ 1.2
SRSF4-206ENST00000605204 NCOA7Q8NI08 942 aa22.53■■□□□ 1.2
SRSF4-206ENST00000605204 PRO3102Q9H379 93 aa22.53■■□□□ 1.2
SRSF4-206ENST00000605204 PRR12Q9ULL5 1215 aa22.53■■□□□ 1.2
SRSF4-206ENST00000605204 ZNF543Q08ER8 600 aa22.52■■□□□ 1.2
SRSF4-206ENST00000605204 PNMA1Q8ND90 353 aa22.52■■□□□ 1.2
SRSF4-206ENST00000605204 ZKSCAN3Q9BRR0 538 aa22.52■■□□□ 1.2
SRSF4-206ENST00000605204 LSG1Q9H089 658 aaKnown RBP22.52■■□□□ 1.2
SRSF4-206ENST00000605204 RAVER2Q9HCJ3 691 aaKnown RBP22.52■■□□□ 1.2
SRSF4-206ENST00000605204 ANO2Q9NQ90 1003 aa22.52■■□□□ 1.2
SRSF4-206ENST00000605204 ERICH2A1L162 156 aa22.51■■□□□ 1.19
SRSF4-206ENST00000605204 MSCO60682 206 aa22.51■■□□□ 1.19
SRSF4-206ENST00000605204 CCL14Q16627 93 aa22.51■■□□□ 1.19
SRSF4-206ENST00000605204 IFIT1BQ5T764 474 aaKnown RBP22.51■■□□□ 1.19
SRSF4-206ENST00000605204 DEFB118Q96PH6 123 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms