RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 STAT3P40763 770 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 PRPF38BQ5VTL8 546 aaKnown RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 GMCL1Q96IK5 515 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 PAWRQ96IZ0 340 aaKnown RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 MROH8Q9H579 483 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 ZNF287Q9HBT7 754 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 HMX1Q9NP08 348 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 OGDHLQ9ULD0 1010 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 SYNPO2Q9UMS6 1093 aa12.64□□□□□ -0.39
TUBE1-210ENST00000604967 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
TUBE1-210ENST00000604967 CEP290O15078 2479 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
TUBE1-210ENST00000604967 ZNF792Q3KQV3 632 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
TUBE1-210ENST00000604967 CCAR1Q8IX12 1150 aaKnown RBP12.63□□□□□ -0.39
TUBE1-210ENST00000604967 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 PRPF38AQ8NAV1 312 aaKnown RBP12.63□□□□□ -0.39
TUBE1-210ENST00000604967 MAML3Q96JK9 1138 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 DSCC1Q9BVC3 393 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
TUBE1-210ENST00000604967 PFASO15067 1338 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
TUBE1-210ENST00000604967 DNAJC25-GNG10A0A024R161 153 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 H0YGN5 161 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 STRNO43815 780 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 SLC16A2P36021 539 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 OLFML2BQ68BL8 750 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 STOX1Q6ZVD7 989 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 ABRAQ8N0Z2 381 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 ASTN1O14525 1302 aa12.62□□□□□ -0.39
TUBE1-210ENST00000604967 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-210ENST00000604967 B4E1Z4 1266 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 SGSM2O43147 1006 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 KDM4AO75164 1064 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 SLC25A27O95847 323 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 SNHG28P0DPA3 235 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 COL6A1P12109 1028 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 SLC1A4P43007 532 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 ANO1Q5XXA6 986 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
TUBE1-210ENST00000604967 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 TRMT44Q8IYL2 757 aaKnown RBP12.61□□□□□ -0.39
TUBE1-210ENST00000604967 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-210ENST00000604967 MMP19Q99542 508 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
TUBE1-210ENST00000604967 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
TUBE1-210ENST00000604967 HIP1O00291 1037 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 ZNF213O14771 459 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 ADCY6O43306 1168 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 PLA2G6O60733 806 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 PDHBP11177 359 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
TUBE1-210ENST00000604967 FCER1AP12319 257 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 CNTN2Q02246 1040 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 MUM1L1Q5H9M0 696 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
TUBE1-210ENST00000604967 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 ZSWIM5Q9P217 1185 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 LCTP09848 1927 aa12.6□□□□□ -0.39
TUBE1-210ENST00000604967 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 SNAI1O95863 264 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-210ENST00000604967 CYP21A2P08686 494 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 ZNF865P0CJ78 1059 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-210ENST00000604967 PTGS1P23219 599 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 SLC4A3P48751 1232 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 STAT2P52630 851 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 IRX5P78411 483 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-210ENST00000604967 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 ENAHQ8N8S7 591 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-210ENST00000604967 ANKS1AQ92625 1134 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 HOMER2Q9NSB8 354 aa12.59□□□□□ -0.39
TUBE1-210ENST00000604967 DDX20Q9UHI6 824 aaKnown RBP12.59□□□□□ -0.39
TUBE1-210ENST00000604967 SOWAHBA6NEL2 793 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 ZBED4O75132 1171 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 MFAP1P55081 439 aaKnown RBP12.58□□□□□ -0.4
TUBE1-210ENST00000604967 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 SEC23AQ15436 765 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 CCDC174Q6PII3 467 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 DCAF4Q8WV16 495 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 TINF2Q9BSI4 451 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms