RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 DNAJC18Q9H819 358 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 RAD21O60216 631 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 CDC25AP30304 524 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 NOLC1Q14978 699 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC12-211ENST00000604367 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
CCDC12-211ENST00000604367 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.15■□□□□ 0.34
CCDC12-211ENST00000604367 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 ZMYND12Q9H0C1 365 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 FAM198AQ9UFP1 575 aa17.15■□□□□ 0.34
CCDC12-211ENST00000604367 ATP1A3P13637 1013 aa17.14■□□□□ 0.33
CCDC12-211ENST00000604367 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
CCDC12-211ENST00000604367 STAMQ92783 540 aa17.14■□□□□ 0.33
CCDC12-211ENST00000604367 XPO4Q9C0E2 1151 aaKnown RBP17.14■□□□□ 0.33
CCDC12-211ENST00000604367 TDRD3Q9H7E2 651 aaKnown RBP17.14■□□□□ 0.33
CCDC12-211ENST00000604367 IFNKQ9P0W0 207 aa17.14■□□□□ 0.33
CCDC12-211ENST00000604367 YDJCA8MPS7 323 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 IKBKBO14920 756 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
CCDC12-211ENST00000604367 MYL5Q02045 173 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 ARID5BQ14865 1188 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 MRIQ9BWK5 157 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 HSD3B7Q9H2F3 369 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 C6orf50Q9HD87 102 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
CCDC12-211ENST00000604367 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
CCDC12-211ENST00000604367 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 DNTTIP2Q5QJE6 756 aaKnown RBP17.13■□□□□ 0.33
CCDC12-211ENST00000604367 NT5DC1Q5TFE4 455 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
CCDC12-211ENST00000604367 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 TMEM60Q9H2L4 133 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 SERPINA10Q9UK55 444 aa17.13■□□□□ 0.33
CCDC12-211ENST00000604367 SMARCA1P28370 1054 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 GNA11P29992 359 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
CCDC12-211ENST00000604367 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 SH3BP5LQ7L8J4 393 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 COA7Q96BR5 231 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 CCDC34Q96HJ3 373 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 EHD4Q9H223 541 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 SNHG28P0DPA3 235 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
CCDC12-211ENST00000604367 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 TTLL6Q8N841 843 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
CCDC12-211ENST00000604367 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
CCDC12-211ENST00000604367 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
CCDC12-211ENST00000604367 SLC16A2P36021 539 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 MORC3Q14149 939 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 LETM2Q2VYF4 491 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 PRMT6Q96LA8 375 aaPredicted RBP17.11■□□□□ 0.33
CCDC12-211ENST00000604367 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
CCDC12-211ENST00000604367 BAG6P46379 1132 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 ZNF543Q08ER8 600 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
CCDC12-211ENST00000604367 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 TMEM260Q9NX78 707 aa17.11■□□□□ 0.33
CCDC12-211ENST00000604367 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
CCDC12-211ENST00000604367 RAD17O75943 681 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 FANCCQ00597 558 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 TRMT44Q8IYL2 757 aaKnown RBP17.1■□□□□ 0.33
CCDC12-211ENST00000604367 IQUBQ8NA54 791 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 BLZF1Q9H2G9 400 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 PP2D1A8MPX8 630 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 FMR1Q06787 632 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC12-211ENST00000604367 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC12-211ENST00000604367 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 LRRC8AQ8IWT6 810 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 REXO1Q8N1G1 1221 aaKnown RBP17.1■□□□□ 0.33
CCDC12-211ENST00000604367 MLKLQ8NB16 471 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
CCDC12-211ENST00000604367 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
CCDC12-211ENST00000604367 GDF11O95390 407 aa17.09■□□□□ 0.33
CCDC12-211ENST00000604367 SERPINC1P01008 464 aa17.09■□□□□ 0.33
CCDC12-211ENST00000604367 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
CCDC12-211ENST00000604367 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
CCDC12-211ENST00000604367 KARSQ15046 597 aaKnown RBP17.09■□□□□ 0.33
CCDC12-211ENST00000604367 E2F4Q16254 413 aa17.09■□□□□ 0.33
CCDC12-211ENST00000604367 TRIML1Q8N9V2 468 aa17.09■□□□□ 0.33
CCDC12-211ENST00000604367 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms