RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 RPAP3Q9H6T3 665 aaPredicted RBP24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 ZSWIM6Q9HCJ5 1215 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 A0A1W2PPC1 479 aa24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 SH2B2O14492 632 aaPredicted RBP24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 TNPO2O14787 897 aaKnown RBP24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 RAD21O60216 631 aa24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 EVI5O60447 810 aa24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 TFRCP02786 760 aaKnown RBP24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 INHAP05111 366 aa24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 CASTP20810 708 aaKnown RBP24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 FLT3LGP49771 235 aa24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 IRX3P78415 501 aaPredicted RBP24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 SPICE1Q8N0Z3 855 aa24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 GTF3C2Q8WUA4 911 aaPredicted RBP24.38■■□□□ 1.49
GRAMD1A-214ENST00000603907 SLC1A4P43007 532 aa24.37■■□□□ 1.49
GRAMD1A-214ENST00000603907 IRF5Q13568 498 aa24.37■■□□□ 1.49
GRAMD1A-214ENST00000603907 FBXL16Q8N461 479 aa24.37■■□□□ 1.49
GRAMD1A-214ENST00000603907 C22orf23Q9BZE7 217 aa24.37■■□□□ 1.49
GRAMD1A-214ENST00000603907 ASCC2Q9H1I8 757 aaPredicted RBP24.37■■□□□ 1.49
GRAMD1A-214ENST00000603907 CYP46A1Q9Y6A2 500 aa24.37■■□□□ 1.49
GRAMD1A-214ENST00000603907 PLA2G6O60733 806 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 SNHG28P0DPA3 235 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 BMP3P12645 472 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 ELNP15502 786 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 RPS6KB1P23443 525 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 RBM25P49756 843 aaKnown RBP24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 RUFY3Q7L099 469 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 SGMS1Q86VZ5 419 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 TANGO6Q9C0B7 1094 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 LY9Q9HBG7 655 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 HOXC10Q9NYD6 342 aa24.36■■□□□ 1.49
GRAMD1A-214ENST00000603907 PDHBP11177 359 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 GCLCP48506 637 aaPredicted RBP24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 COG2Q14746 738 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 FAM83BQ5T0W9 1011 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 LBX2Q6XYB7 198 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 COA7Q96BR5 231 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 DEFB118Q96PH6 123 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 FEM1BQ9UK73 627 aa24.35■■□□□ 1.49
GRAMD1A-214ENST00000603907 COL9A3Q14050 684 aaPredicted RBP24.34■■□□□ 1.49
GRAMD1A-214ENST00000603907 CATIPQ7Z7H3 387 aa24.34■■□□□ 1.49
GRAMD1A-214ENST00000603907 SZT2Q5T011 3432 aa24.34■■□□□ 1.49
GRAMD1A-214ENST00000603907 CCDC69A6NI79 296 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 FLOT1O75955 427 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 HERVK_113P62684 666 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 FGD1P98174 961 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 GPATCH4Q5T3I0 446 aaKnown RBP24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 FAM160B2Q86V87 743 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 SLC17A8Q8NDX2 589 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 CHURC1Q8WUH1 139 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 MAP3K14Q99558 947 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 P2RX7Q99572 595 aaKnown RBP24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 AGXT2Q9BYV1 514 aa24.33■■□□□ 1.49
GRAMD1A-214ENST00000603907 DDAH1O94760 285 aa24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 DSG3P32926 999 aa24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 NFXL1Q6ZNB6 911 aa24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 IL27Q8NEV9 243 aa24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 NUP88Q99567 741 aaPredicted RBP24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 SLF1Q9BQI6 1058 aa24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 LRRC2Q9BYS8 371 aa24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 PAK6Q9NQU5 681 aaPredicted RBP24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 RANBP2P49792 3224 aaKnown RBP24.32■■□□□ 1.48
GRAMD1A-214ENST00000603907 CALM1P0DP23 149 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 CALM2P0DP24 149 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 CALM3P0DP25 149 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 FDX1P10109 184 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 STAT2P52630 851 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 ZNF543Q08ER8 600 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 TROAPQ12815 778 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 CCDC96Q2M329 555 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 ASPRV1Q53RT3 343 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 Q6ZUG5 572 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 MB21D1Q8N884 522 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 PRPF38AQ8NAV1 312 aaKnown RBP24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 SENP2Q9HC62 589 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 PPP1R9AQ9ULJ8 1098 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 SLC12A7Q9Y666 1083 aa24.31■■□□□ 1.48
GRAMD1A-214ENST00000603907 SPDYE16A6NNV3 312 aaPredicted RBP24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 PARP1P09874 1014 aaKnown RBP24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 CPA1P15085 419 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 RCAN1P53805 252 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 BTNL9Q6UXG8 535 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 SYNE3Q6ZMZ3 975 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 ZNF654Q8IZM8 581 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 ANKRD13CQ8N6S4 541 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 TCEANC2Q96MN5 208 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 CRISPLD2Q9H0B8 497 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 ALDH8A1Q9H2A2 487 aaPredicted RBP24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 GPHNQ9NQX3 736 aaPredicted RBP24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 MTMR7Q9Y216 660 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 DOCK3Q8IZD9 2030 aa24.3■■□□□ 1.48
GRAMD1A-214ENST00000603907 TMEM232C9JQI7 657 aa24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 FAM110CQ1W6H9 321 aa24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 KCTD1Q719H9 257 aa24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 NECAB2Q7Z6G3 386 aa24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 PAWRQ96IZ0 340 aaKnown RBP24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 TBC1D32Q96NH3 1257 aa24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 UPF3BQ9BZI7 483 aaKnown RBP24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 PDRG1Q9NUG6 133 aa24.29■■□□□ 1.48
GRAMD1A-214ENST00000603907 ISY1Q9ULR0 285 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms