RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 VPS53Q5VIR6 699 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 B4GALNT3Q6L9W6 998 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 LBX2Q6XYB7 198 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 RASGRP2Q7LDG7 609 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 CCAR1Q8IX12 1150 aaKnown RBP11.86□□□□□ -0.51
SPCS1-205ENST00000602728 MOV10L1Q9BXT6 1211 aaKnown RBP11.86□□□□□ -0.51
SPCS1-205ENST00000602728 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 LTBP2Q14767 1821 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 A0A0D9SFI3 127 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 H0YGN5 161 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
SPCS1-205ENST00000602728 IGHDP01880 384 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 RGS2P41220 211 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
SPCS1-205ENST00000602728 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
SPCS1-205ENST00000602728 MAP2K5Q13163 448 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 GRB14Q14449 540 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 MAP3K21Q5TCX8 1036 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 IFNL3Q8IZI9 196 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 LRRC47Q8N1G4 583 aaKnown RBP11.85□□□□□ -0.51
SPCS1-205ENST00000602728 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 GCC1Q96CN9 775 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
SPCS1-205ENST00000602728 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
SPCS1-205ENST00000602728 CCDC17Q96LX7 622 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 SH2D4AQ9H788 454 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 TACC3Q9Y6A5 838 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 SMCHD1A6NHR9 2005 aa11.85□□□□□ -0.51
SPCS1-205ENST00000602728 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 PTPREP23469 700 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 FOSBP53539 338 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 CCNA1P78396 465 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 PLS1Q14651 629 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 LPAR1Q92633 364 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 CHMP4CQ96CF2 233 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 CEP95Q96GE4 821 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 SPATC1LQ9H0A9 340 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 NAPBQ9H115 298 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 MKNK2Q9HBH9 465 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 RPTORQ8N122 1335 aa11.84□□□□□ -0.51
SPCS1-205ENST00000602728 EVI5O60447 810 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 NDUFB10O96000 172 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 TFRCP02786 760 aaKnown RBP11.83□□□□□ -0.52
SPCS1-205ENST00000602728 GNAT2P19087 354 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 ERCC3P19447 782 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 PPARAQ07869 468 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 COG2Q14746 738 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 FAM47AQ5JRC9 791 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
SPCS1-205ENST00000602728 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 PAWRQ96IZ0 340 aaKnown RBP11.83□□□□□ -0.52
SPCS1-205ENST00000602728 KANSL2Q9H9L4 492 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 HMX1Q9NP08 348 aaPredicted RBP11.83□□□□□ -0.52
SPCS1-205ENST00000602728 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 VPS9D1Q9Y2B5 631 aa11.83□□□□□ -0.52
SPCS1-205ENST00000602728 MYH6P13533 1939 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 SLC15A5A6NIM6 579 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
SPCS1-205ENST00000602728 XRCC5P13010 732 aaKnown RBP11.82□□□□□ -0.52
SPCS1-205ENST00000602728 ADORA2AP29274 412 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 CYP2C19P33261 490 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 NMIQ13287 307 aaPredicted RBP11.82□□□□□ -0.52
SPCS1-205ENST00000602728 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
SPCS1-205ENST00000602728 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 DPF3Q92784 378 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 SUPT16HQ9Y5B9 1047 aaKnown RBP11.82□□□□□ -0.52
SPCS1-205ENST00000602728 IVNS1ABPQ9Y6Y0 642 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 PFASO15067 1338 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 TRIOBPQ9H2D6 2365 aa11.82□□□□□ -0.52
SPCS1-205ENST00000602728 NMT2O60551 498 aa11.81□□□□□ -0.52
SPCS1-205ENST00000602728 COBLO75128 1261 aa11.81□□□□□ -0.52
SPCS1-205ENST00000602728 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
SPCS1-205ENST00000602728 EVI5LQ96CN4 794 aa11.81□□□□□ -0.52
SPCS1-205ENST00000602728 CLIP2Q9UDT6 1046 aa11.81□□□□□ -0.52
SPCS1-205ENST00000602728 ZNF214Q9UL59 606 aaPredicted RBP11.81□□□□□ -0.52
SPCS1-205ENST00000602728 PPP1R9AQ9ULJ8 1098 aa11.81□□□□□ -0.52
SPCS1-205ENST00000602728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPCS1-205ENST00000602728 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 VWA5AO00534 786 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 TAL1P17542 331 aaPredicted RBP11.8□□□□□ -0.52
SPCS1-205ENST00000602728 HABP4Q5JVS0 413 aaKnown RBP11.8□□□□□ -0.52
SPCS1-205ENST00000602728 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 C7orf61Q8IZ16 206 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 SHCBP1Q8NEM2 672 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 HTATIP2Q9BUP3 242 aa11.8□□□□□ -0.52
SPCS1-205ENST00000602728 NACAP1Q9BZK3 213 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms