RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 STAT3P40763 770 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 RGS2P41220 211 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 UBXN2AP68543 259 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 CCDC96Q2M329 555 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 KCTD1Q719H9 257 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 RASGRP2Q7LDG7 609 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 RALYLQ86SE5 291 aaKnown RBP19.8■□□□□ 0.76
TRIM28-215ENST00000601150 NCAPG2Q86XI2 1143 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 RIOX2Q8IUF8 465 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 ANKS1AQ92625 1134 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 USP6NLQ92738 828 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 TAF6LQ9Y6J9 622 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 TNKSO95271 1327 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 STRNO43815 780 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 MAP2K5Q13163 448 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 GRB14Q14449 540 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 CYB5R4Q7L1T6 521 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 ENAHQ8N8S7 591 aaPredicted RBP19.79■□□□□ 0.76
TRIM28-215ENST00000601150 NCOA7Q8NI08 942 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 TEX13BQ9BXU2 312 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 KAT14Q9H8E8 782 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 SLC38A10Q9HBR0 1119 aa19.79■□□□□ 0.76
TRIM28-215ENST00000601150 ATP2A1O14983 1001 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 MYCP01106 439 aaPredicted RBP19.78■□□□□ 0.76
TRIM28-215ENST00000601150 INHAP05111 366 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 PDHBP11177 359 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 NECTIN1Q15223 517 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 STOX1Q6ZVD7 989 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 TRMT44Q8IYL2 757 aaKnown RBP19.78■□□□□ 0.76
TRIM28-215ENST00000601150 APBA2Q99767 749 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 TMEM106CQ9BVX2 250 aa19.78■□□□□ 0.76
TRIM28-215ENST00000601150 SLC27A2O14975 620 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 OAZ1P54368 228 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 CREB3L3Q68CJ9 461 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 SNRNP48Q6IEG0 339 aaKnown RBP19.77■□□□□ 0.76
TRIM28-215ENST00000601150 CPXCR1Q8N123 301 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 PNMA1Q8ND90 353 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 GPCPD1Q9NPB8 672 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 PLXNA1Q9UIW2 1896 aa19.77■□□□□ 0.76
TRIM28-215ENST00000601150 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
TRIM28-215ENST00000601150 HMGCRP04035 888 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 SNHG28P0DPA3 235 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 FCER1AP12319 257 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 CCL5P13501 91 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 ZKSCAN1P17029 563 aaPredicted RBP19.76■□□□□ 0.75
TRIM28-215ENST00000601150 ZNF543Q08ER8 600 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 MTFR1Q15390 333 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 SEC23AQ15436 765 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 IFIT1BQ5T764 474 aaKnown RBP19.76■□□□□ 0.75
TRIM28-215ENST00000601150 BTNL9Q6UXG8 535 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 ABRAQ8N0Z2 381 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 TRIB2Q92519 343 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 RAVER2Q9HCJ3 691 aaKnown RBP19.76■□□□□ 0.75
TRIM28-215ENST00000601150 PRR12Q9ULL5 1215 aa19.76■□□□□ 0.75
TRIM28-215ENST00000601150 HOXC6P09630 235 aa19.75■□□□□ 0.75
TRIM28-215ENST00000601150 ADORA2AP29274 412 aa19.75■□□□□ 0.75
TRIM28-215ENST00000601150 RGS19P49795 217 aa19.75■□□□□ 0.75
TRIM28-215ENST00000601150 RNF20Q5VTR2 975 aa19.75■□□□□ 0.75
TRIM28-215ENST00000601150 TTBK2Q6IQ55 1244 aa19.75■□□□□ 0.75
TRIM28-215ENST00000601150 DPP9Q86TI2 863 aa19.75■□□□□ 0.75
TRIM28-215ENST00000601150 KIAA0100Q14667 2235 aaKnown RBP19.74■□□□□ 0.75
TRIM28-215ENST00000601150 ERICH2A1L162 156 aa19.74■□□□□ 0.75
TRIM28-215ENST00000601150 POTEFA5A3E0 1075 aa19.74■□□□□ 0.75
TRIM28-215ENST00000601150 IFIT3O14879 490 aaKnown RBP19.74■□□□□ 0.75
TRIM28-215ENST00000601150 SLC16A2P36021 539 aa19.74■□□□□ 0.75
TRIM28-215ENST00000601150 SLC4A3P48751 1232 aa19.74■□□□□ 0.75
TRIM28-215ENST00000601150 SART3Q15020 963 aaKnown RBP19.74■□□□□ 0.75
TRIM28-215ENST00000601150 GPATCH4Q5T3I0 446 aaKnown RBP19.74■□□□□ 0.75
TRIM28-215ENST00000601150 SYDE2Q5VT97 1194 aa19.74■□□□□ 0.75
TRIM28-215ENST00000601150 MB21D2Q8IYB1 491 aaPredicted RBP19.74■□□□□ 0.75
TRIM28-215ENST00000601150 MMP19Q99542 508 aa19.74■□□□□ 0.75
TRIM28-215ENST00000601150 KCTD2Q14681 263 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 CCL14Q16627 93 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 NPLOC4Q8TAT6 608 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 RNF208Q9H0X6 261 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 UNC93B1Q9H1C4 597 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 SLC5A4Q9NY91 659 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 RIPK3Q9Y572 518 aa19.73■□□□□ 0.75
TRIM28-215ENST00000601150 ANTXR2P58335 489 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 WTAPQ15007 396 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 ASPRV1Q53RT3 343 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 TMEM67Q5HYA8 995 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 CCDC174Q6PII3 467 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 CHST3Q7LGC8 479 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 RANBP17Q9H2T7 1088 aaKnown RBP19.72■□□□□ 0.75
TRIM28-215ENST00000601150 FBXO40Q9UH90 709 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 MYH6P13533 1939 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 ZNF536O15090 1300 aa19.72■□□□□ 0.75
TRIM28-215ENST00000601150 CENPFP49454 3210 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 COBLO75128 1261 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 REC8O95072 547 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 GJB1P08034 283 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 GOLGA8HP0CJ92 632 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 MCM5P33992 734 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 SNAP25P60880 206 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 TRIM32Q13049 653 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 TKFCQ3LXA3 575 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 CHST13Q8NET6 341 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 AGBL1Q96MI9 1066 aa19.71■□□□□ 0.75
TRIM28-215ENST00000601150 MTA3Q9BTC8 594 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms