RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 LBHD1Q9BQE6 289 aaPredicted RBP10.9□□□□□ -0.66
FARP1-232ENST00000601009 TINF2Q9BSI4 451 aa10.9□□□□□ -0.66
FARP1-232ENST00000601009 HELLSQ9NRZ9 838 aa10.9□□□□□ -0.66
FARP1-232ENST00000601009 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 TSPY2A6NKD2 308 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
FARP1-232ENST00000601009 BMP3P12645 472 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 AKR1A1P14550 325 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 SYN1P17600 705 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 STAT2P52630 851 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 PDE1AP54750 535 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
FARP1-232ENST00000601009 TFAP4Q01664 338 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
FARP1-232ENST00000601009 ZNF792Q3KQV3 632 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 RNF180Q86T96 592 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 FAM160B2Q86V87 743 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 TDHQ8IZJ6 230 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 LRRC47Q8N1G4 583 aaKnown RBP10.89□□□□□ -0.67
FARP1-232ENST00000601009 TRPV1Q8NER1 839 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 CHURC1Q8WUH1 139 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 UBE2OQ9C0C9 1292 aaKnown RBP10.89□□□□□ -0.67
FARP1-232ENST00000601009 RWDD1Q9H446 243 aaPredicted RBP10.89□□□□□ -0.67
FARP1-232ENST00000601009 SLC38A10Q9HBR0 1119 aa10.89□□□□□ -0.67
FARP1-232ENST00000601009 SYNGAP1Q96PV0 1343 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 PGK2P07205 417 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 SLC1A4P43007 532 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
FARP1-232ENST00000601009 FAM47AQ5JRC9 791 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 GJC2Q5T442 439 aaPredicted RBP10.88□□□□□ -0.67
FARP1-232ENST00000601009 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
FARP1-232ENST00000601009 CPXCR1Q8N123 301 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 XPNPEP3Q9NQH7 507 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 STX8Q9UNK0 236 aa10.88□□□□□ -0.67
FARP1-232ENST00000601009 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 RANBP6O60518 1105 aaKnown RBP10.87□□□□□ -0.67
FARP1-232ENST00000601009 PCP11498 1178 aaKnown RBP10.87□□□□□ -0.67
FARP1-232ENST00000601009 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 RTP1P59025 263 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 LRRC41Q15345 812 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 ALX1Q15699 326 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 MCMDC2Q4G0Z9 681 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 ANO1Q5XXA6 986 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
FARP1-232ENST00000601009 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
FARP1-232ENST00000601009 TOMM22Q9NS69 142 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 ANAPC4Q9UJX5 808 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 ATP11BQ9Y2G3 1177 aa10.87□□□□□ -0.67
FARP1-232ENST00000601009 ZMYM6O95789 1325 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 TMEM232C9JQI7 657 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 ORC4O43929 436 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 PLA2G6O60733 806 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 TKFCQ3LXA3 575 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 LRIT3Q3SXY7 679 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 PRAMEF19Q5SWL8 479 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 MAMDC4Q6UXC1 1216 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 SLC39A5Q6ZMH5 540 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 LNPKQ9C0E8 428 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 ACAD9Q9H845 621 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 SPC25Q9HBM1 224 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 RAVER2Q9HCJ3 691 aaKnown RBP10.86□□□□□ -0.67
FARP1-232ENST00000601009 FAM184BQ9ULE4 1060 aa10.86□□□□□ -0.67
FARP1-232ENST00000601009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
FARP1-232ENST00000601009 SMCHD1A6NHR9 2005 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 ADCYAP1R1P41586 468 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 NT5C2P49902 561 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
FARP1-232ENST00000601009 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 SNX17Q15036 470 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 C1orf53Q5VUE5 145 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 DCAF4Q8WV16 495 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 TSEN34Q9BSV6 310 aaKnown RBP10.85□□□□□ -0.67
FARP1-232ENST00000601009 ABHD16BQ9H3Z7 469 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 RNF41Q9H4P4 317 aaPredicted RBP10.85□□□□□ -0.67
FARP1-232ENST00000601009 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
FARP1-232ENST00000601009 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 PHF24Q9UPV7 400 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 RIPK3Q9Y572 518 aa10.85□□□□□ -0.67
FARP1-232ENST00000601009 LAMA2P24043 3122 aaKnown RBP10.85□□□□□ -0.67
FARP1-232ENST00000601009 CCDC171Q6TFL3 1326 aa10.84□□□□□ -0.67
FARP1-232ENST00000601009 MOXD2PA6NHM9 499 aa10.84□□□□□ -0.67
FARP1-232ENST00000601009 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
FARP1-232ENST00000601009 HIP1O00291 1037 aa10.84□□□□□ -0.67
FARP1-232ENST00000601009 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
FARP1-232ENST00000601009 ZNF865P0CJ78 1059 aaPredicted RBP10.84□□□□□ -0.67
FARP1-232ENST00000601009 MCCP23508 829 aa10.84□□□□□ -0.67
FARP1-232ENST00000601009 CCDC96Q2M329 555 aa10.84□□□□□ -0.67
FARP1-232ENST00000601009 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
FARP1-232ENST00000601009 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms