RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	RARS	P54136	660 aa	Known RBP	13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	CCDC174	Q6PII3	467 aa		13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	TMEM179	Q6ZVK1	233 aa		13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	ARHGAP45	Q92619	1136 aa		13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	VWCE	Q96DN2	955 aa		13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	SLC28A3	Q9HAS3	691 aa		13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	CNPY2	Q9Y2B0	182 aa		13.43	□□□□□ -0.26
NUP62-222	ENST00000600935	BRWD1	Q9NSI6	2320 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	UMODL1	Q5DID0	1318 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	DNAJC25-GNG10	A0A024R161	153 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	SMIM22	K7EJ46	135 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	VWA5A	O00534	786 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	ERC2	O15083	957 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	WDR46	O15213	610 aa	Known RBP	13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	POLR3D	P05423	398 aa	Predicted RBP	13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	AKR1B1	P15121	316 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	MYOG	P15173	224 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	RABGGTB	P53611	331 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	KCTD2	Q14681	263 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	MAMDC4	Q6UXC1	1216 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	EAF2	Q96CJ1	260 aa	Predicted RBP	13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	GLT1D1	Q96MS3	346 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	UPF3A	Q9H1J1	476 aa	Known RBP	13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	FAM184B	Q9ULE4	1060 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935	HCN4	Q9Y3Q4	1203 aa		13.42	□□□□□ -0.26
NUP62-222	ENST00000600935		A0A0U1RQG5	324 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	STAT3	P40763	770 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	ICA1	Q05084	483 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	MICALL1	Q8N3F8	863 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	MSL3	Q8N5Y2	521 aa	Known RBP	13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	SSH3	Q8TE77	659 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	DYNLL2	Q96FJ2	89 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	FGD4	Q96M96	766 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	MCM9	Q9NXL9	1143 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	PPP1R9A	Q9ULJ8	1098 aa		13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.41	□□□□□ -0.26
NUP62-222	ENST00000600935	C6orf222	P0C671	652 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	TRIM27	P14373	513 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	POU3F3	P20264	500 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	GJA9	P57773	515 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	TMED8	Q6PL24	325 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	OTOP2	Q7RTS6	562 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	SLC43A3	Q8NBI5	491 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	SDR42E1	Q8WUS8	393 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	ARHGEF10L	Q9HCE6	1279 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	RIPK3	Q9Y572	518 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	MTCH2	Q9Y6C9	303 aa		13.4	□□□□□ -0.26
NUP62-222	ENST00000600935	GREB1L	Q9C091	1923 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	MAGEB6P1	A0A0J9YX57	407 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	APBB1	O00213	710 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	RFXAP	O00287	272 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	TLL1	O43897	1013 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	FGB	P02675	491 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	NKX3-2	P78367	333 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	AAK1	Q2M2I8	961 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	TMEM31	Q5JXX7	168 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	PPP2R2D	Q66LE6	453 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	PCSK9	Q8NBP7	692 aa	Known RBP	13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	KATNBL1	Q9H079	304 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	WNT8A	Q9H1J5	351 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	ASTN1	O14525	1302 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	GRIN2D	O15399	1336 aa		13.39	□□□□□ -0.27
NUP62-222	ENST00000600935	EPOP	A6NHQ4	379 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	GPR37L1	O60883	481 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	SURF6	O75683	361 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	EEF2	P13639	858 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	PDE6A	P16499	860 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	COPB2	P35606	906 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	OS9	Q13438	667 aa	Predicted RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	ACVR2B	Q13705	512 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	CCDC144B	Q3MJ40	725 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	KRT40	Q6A162	431 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	LCORL	Q8N3X6	602 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	MTIF3	Q9H2K0	278 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	HIPK3	Q9H422	1215 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	SH2D4A	Q9H788	454 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	SWAP70	Q9UH65	585 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	NOP58	Q9Y2X3	529 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	PCDHA11	Q9Y5I1	949 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	C5orf42	Q9H799	3197 aa		13.38	□□□□□ -0.27
NUP62-222	ENST00000600935	TCRBV5S4A2T	A0A5A2	114 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	FAM86C2P	A6NEL3	165 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	TLR3	O15455	904 aa	Known RBP	13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	BCAR3	O75815	825 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	ATP8B2	P98198	1209 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	GNAS	Q5JWF2	1037 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	FAM83B	Q5T0W9	1011 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	VTI1A	Q96AJ9	217 aa		13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	NOC4L	Q9BVI4	516 aa	Known RBP	13.37	□□□□□ -0.27
NUP62-222	ENST00000600935	SCN5A	Q14524	2016 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms