RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 LAMA4Q16363 1823 aa19.88■□□□□ 0.77
NOTCH3-205ENST00000600841 COBLO75128 1261 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 MCCP23508 829 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 CCND3P30281 292 aaPredicted RBP19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 SLC1A4P43007 532 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 OLFML2BQ68BL8 750 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 SNRNP48Q6IEG0 339 aaKnown RBP19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 TBC1D10CQ8IV04 446 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 ANKLE1Q8NAG6 615 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 HTATIP2Q9BUP3 242 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 DSCC1Q9BVC3 393 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 CEP290O15078 2479 aa19.87■□□□□ 0.77
NOTCH3-205ENST00000600841 TMEM232C9JQI7 657 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 NOVP48745 357 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 STAT2P52630 851 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 KCTD2Q14681 263 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 CHURC1Q8WUH1 139 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 CHMP4CQ96CF2 233 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 SLC38A10Q9HBR0 1119 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 TCP11L1Q9NUJ3 509 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 OGDHLQ9ULD0 1010 aa19.86■□□□□ 0.77
NOTCH3-205ENST00000600841 ATP2A1O14983 1001 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 FDX1P10109 184 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 CYP2C19P33261 490 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 IKQ13123 557 aaPredicted RBP19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 FAM160B2Q86V87 743 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 CPXCR1Q8N123 301 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 DPF3Q92784 378 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 CTNNA3Q9UI47 895 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 MTMR7Q9Y216 660 aa19.85■□□□□ 0.77
NOTCH3-205ENST00000600841 PLXNA1Q9UIW2 1896 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 RAD50Q92878 1312 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 TOP1P11387 765 aaKnown RBP19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 SLC4A3P48751 1232 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 NT5C2P49902 561 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 OAZ1P54368 228 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 RCSD1Q6JBY9 416 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 KCTD1Q719H9 257 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 NECAB2Q7Z6G3 386 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 DCAF4Q8WV16 495 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 RUFY2Q8WXA3 655 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 ESR2Q92731 530 aa19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 PAWRQ96IZ0 340 aaKnown RBP19.84■□□□□ 0.77
NOTCH3-205ENST00000600841 NEDD4P46934 1319 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 PLA2G6O60733 806 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 IGHA2P01877 340 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 CNGA1P29973 690 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 IMMTQ16891 758 aaKnown RBP19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 MAML3Q96JK9 1138 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 TMEM47Q9BQJ4 181 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 RAVER2Q9HCJ3 691 aaKnown RBP19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 RIPK3Q9Y572 518 aa19.83■□□□□ 0.77
NOTCH3-205ENST00000600841 PGK2P07205 417 aa19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 CHMLP26374 656 aa19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 CCDC96Q2M329 555 aa19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 LHX8Q68G74 356 aa19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 DIS3LQ8TF46 1054 aaKnown RBP19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 TTC14Q96N46 770 aa19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 IL25Q9H293 177 aa19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 DIS3Q9Y2L1 958 aaKnown RBP19.82■□□□□ 0.76
NOTCH3-205ENST00000600841 FRMPD3Q5JV73 1810 aa19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 MSCO60682 206 aa19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 CYBAP13498 195 aa19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 RASGRP2Q7LDG7 609 aa19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 TRPV1Q8NER1 839 aa19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 FBXO40Q9UH90 709 aa19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 DDX20Q9UHI6 824 aaKnown RBP19.81■□□□□ 0.76
NOTCH3-205ENST00000600841 ZNF792Q3KQV3 632 aa19.8■□□□□ 0.76
NOTCH3-205ENST00000600841 CENPQQ7L2Z9 268 aaPredicted RBP19.8■□□□□ 0.76
NOTCH3-205ENST00000600841 IQCA1Q86XH1 822 aa19.8■□□□□ 0.76
NOTCH3-205ENST00000600841 CHST13Q8NET6 341 aa19.8■□□□□ 0.76
NOTCH3-205ENST00000600841 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
NOTCH3-205ENST00000600841 B4E1Z4 1266 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 H0YGN5 161 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 KDM4AO75164 1064 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 MNX1P50219 401 aaPredicted RBP19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 CCDC178Q5BJE1 867 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 ZKSCAN3Q9BRR0 538 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 TINF2Q9BSI4 451 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 KRT23Q9C075 422 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 C11orf49Q9H6J7 331 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 CNNM2Q9H8M5 875 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 PRR12Q9ULL5 1215 aa19.79■□□□□ 0.76
NOTCH3-205ENST00000600841 CCDC174Q6PII3 467 aa19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 DGKHQ86XP1 1220 aa19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 ANKRD35Q8N283 1001 aa19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 NRBP1Q9UHY1 535 aa19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 NR2E3Q9Y5X4 410 aa19.78■□□□□ 0.76
NOTCH3-205ENST00000600841 ZNF536O15090 1300 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 SEPT4O43236 478 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 EVI5O60447 810 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 PDHBP11177 359 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 TKFCQ3LXA3 575 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 PRAMEF19Q5SWL8 479 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 SYDE2Q5VT97 1194 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 TTBK2Q6IQ55 1244 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 BTNL9Q6UXG8 535 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 AGBL1Q96MI9 1066 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms