RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PDHBP11177 359 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 SEC23AQ15436 765 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 CCL14Q16627 93 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 DGKHQ86XP1 1220 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 DCAF4Q8WV16 495 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 KIFC2Q96AC6 838 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 CNNM2Q9H8M5 875 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 RIPK3Q9Y572 518 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 ZNF536O15090 1300 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 TNKSO95271 1327 aa18.55■□□□□ 0.56
RPS28-203ENST00000600659 E7EWF7 191 aa18.54■□□□□ 0.56
RPS28-203ENST00000600659 MYCP01106 439 aaPredicted RBP18.54■□□□□ 0.56
RPS28-203ENST00000600659 NPLOC4Q8TAT6 608 aa18.54■□□□□ 0.56
RPS28-203ENST00000600659 ZSCAN10Q96SZ4 725 aaPredicted RBP18.54■□□□□ 0.56
RPS28-203ENST00000600659 APBA2Q99767 749 aa18.54■□□□□ 0.56
RPS28-203ENST00000600659 KRT23Q9C075 422 aa18.54■□□□□ 0.56
RPS28-203ENST00000600659 FLRT1Q9NZU1 646 aa18.54■□□□□ 0.56
RPS28-203ENST00000600659 SLC25A27O95847 323 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 HMGCRP04035 888 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 STAT3P40763 770 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 RGS2P41220 211 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 STAT2P52630 851 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 ANTXR2P58335 489 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 PLS1Q14651 629 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 NECTIN1Q15223 517 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 MAP3K21Q5TCX8 1036 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 WDR78Q5VTH9 848 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 TTBK2Q6IQ55 1244 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 BTNL9Q6UXG8 535 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 MB21D2Q8IYB1 491 aaPredicted RBP18.53■□□□□ 0.56
RPS28-203ENST00000600659 SHISA4Q96DD7 197 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 UNC93B1Q9H1C4 597 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 MROH8Q9H579 483 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 MTMR7Q9Y216 660 aa18.53■□□□□ 0.56
RPS28-203ENST00000600659 COBLO75128 1261 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 CCL5P13501 91 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 ADORA2AP29274 412 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 ZNF543Q08ER8 600 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.52■□□□□ 0.56
RPS28-203ENST00000600659 FAM160B2Q86V87 743 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 NCAPG2Q86XI2 1143 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
RPS28-203ENST00000600659 TEX13BQ9BXU2 312 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 RAVER2Q9HCJ3 691 aaKnown RBP18.52■□□□□ 0.56
RPS28-203ENST00000600659 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 PRR12Q9ULL5 1215 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 FRMPD2Q68DX3 1309 aaPredicted RBP18.52■□□□□ 0.56
RPS28-203ENST00000600659 MCM3APO60318 1980 aa18.52■□□□□ 0.56
RPS28-203ENST00000600659 MYH6P13533 1939 aa18.51■□□□□ 0.55
RPS28-203ENST00000600659 SLC27A2O14975 620 aa18.51■□□□□ 0.55
RPS28-203ENST00000600659 EN2P19622 333 aaPredicted RBP18.51■□□□□ 0.55
RPS28-203ENST00000600659 SNRNP48Q6IEG0 339 aaKnown RBP18.51■□□□□ 0.55
RPS28-203ENST00000600659 ABRAQ8N0Z2 381 aa18.51■□□□□ 0.55
RPS28-203ENST00000600659 SENP2Q9HC62 589 aa18.51■□□□□ 0.55
RPS28-203ENST00000600659 PAK6Q9NQU5 681 aaPredicted RBP18.51■□□□□ 0.55
RPS28-203ENST00000600659 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
RPS28-203ENST00000600659 STRNO43815 780 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 TAL1P17542 331 aaPredicted RBP18.5■□□□□ 0.55
RPS28-203ENST00000600659 OAZ1P54368 228 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 UBXN2AP68543 259 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 CCDC96Q2M329 555 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 CREB3L3Q68CJ9 461 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 PNMA1Q8ND90 353 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 CHURC1Q8WUH1 139 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 IVNS1ABPQ9Y6Y0 642 aa18.5■□□□□ 0.55
RPS28-203ENST00000600659 ZBED4O75132 1171 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 GJB1P08034 283 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 FDX1P10109 184 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 ZKSCAN1P17029 563 aaPredicted RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 SLC16A2P36021 539 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 SNAP25P60880 206 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 CCDC178Q5BJE1 867 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 CPXCR1Q8N123 301 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 NCOA7Q8NI08 942 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 RANBP17Q9H2T7 1088 aaKnown RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 CWC22Q9HCG8 908 aaKnown RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 BIN2Q9UBW5 565 aaPredicted RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 PRKAR2AP13861 404 aaKnown RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 COPB2P35606 906 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 CACNB2Q08289 660 aaPredicted RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 SYDE2Q5VT97 1194 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 CHST3Q7LGC8 479 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 AGBL1Q96MI9 1066 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 GPCPD1Q9NPB8 672 aa18.49■□□□□ 0.55
RPS28-203ENST00000600659 ISY1Q9ULR0 285 aaKnown RBP18.49■□□□□ 0.55
RPS28-203ENST00000600659 DNAJC25-GNG10A0A024R161 153 aa18.48■□□□□ 0.55
RPS28-203ENST00000600659 GJA8P48165 433 aa18.48■□□□□ 0.55
RPS28-203ENST00000600659 TRDNQ13061 729 aa18.48■□□□□ 0.55
RPS28-203ENST00000600659 IKQ13123 557 aaPredicted RBP18.48■□□□□ 0.55
RPS28-203ENST00000600659 TRMT44Q8IYL2 757 aaKnown RBP18.48■□□□□ 0.55
RPS28-203ENST00000600659 MMP19Q99542 508 aa18.48■□□□□ 0.55
RPS28-203ENST00000600659 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.48■□□□□ 0.55
RPS28-203ENST00000600659 CPVLQ9H3G5 476 aa18.48■□□□□ 0.55
RPS28-203ENST00000600659 KAT14Q9H8E8 782 aa18.48■□□□□ 0.55
RPS28-203ENST00000600659 BAZ2BQ9UIF8 2168 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms