RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 RLFQ13129 1914 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 PEX10O60683 326 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 FDX1P10109 184 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 LACTBP83111 547 aaPredicted RBP22.59■■□□□ 1.21
UPF1-209ENST00000600310 FGD1P98174 961 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 IKQ13123 557 aaPredicted RBP22.59■■□□□ 1.21
UPF1-209ENST00000600310 GRM4Q14833 912 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 Q3C1V9 767 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 Q6ZUG5 572 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 REPS2Q8NFH8 660 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 ERO1AQ96HE7 468 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 MAP3K14Q99558 947 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 UPF3BQ9BZI7 483 aaKnown RBP22.59■■□□□ 1.21
UPF1-209ENST00000600310 SLC12A7Q9Y666 1083 aa22.59■■□□□ 1.21
UPF1-209ENST00000600310 PALM3A6NDB9 673 aaPredicted RBP22.58■■□□□ 1.21
UPF1-209ENST00000600310 GOLGA8HP0CJ92 632 aa22.58■■□□□ 1.21
UPF1-209ENST00000600310 SLC16A2P36021 539 aa22.58■■□□□ 1.21
UPF1-209ENST00000600310 RBM25P49756 843 aaKnown RBP22.58■■□□□ 1.21
UPF1-209ENST00000600310 SYDE2Q5VT97 1194 aa22.58■■□□□ 1.21
UPF1-209ENST00000600310 PRR12Q9ULL5 1215 aa22.58■■□□□ 1.21
UPF1-209ENST00000600310 ZBED4O75132 1171 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 TMEM132BQ14DG7 1078 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 CD99L2Q8TCZ2 262 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 NUP133Q8WUM0 1156 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 MYL10Q9BUA6 226 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 SLC38A10Q9HBR0 1119 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 MAD2L2Q9UI95 211 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 BRPF3Q9ULD4 1205 aa22.57■■□□□ 1.2
UPF1-209ENST00000600310 CALM1P0DP23 149 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 CALM2P0DP24 149 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 CALM3P0DP25 149 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 CCNA1P78396 465 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 KIF22Q14807 665 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 APOA5Q6Q788 366 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 SYNE3Q6ZMZ3 975 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 STAG2Q8N3U4 1231 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 BRF1Q92994 677 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 UBA5Q9GZZ9 404 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 SPATC1LQ9H0A9 340 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 PDRG1Q9NUG6 133 aa22.56■■□□□ 1.2
UPF1-209ENST00000600310 ZNF214Q9UL59 606 aaPredicted RBP22.56■■□□□ 1.2
UPF1-209ENST00000600310 PARP14Q460N5 1801 aa22.55■■□□□ 1.2
UPF1-209ENST00000600310 KLRF2D3W0D1 207 aa22.55■■□□□ 1.2
UPF1-209ENST00000600310 ATP2A1O14983 1001 aa22.55■■□□□ 1.2
UPF1-209ENST00000600310 CTGFP29279 349 aa22.55■■□□□ 1.2
UPF1-209ENST00000600310 CAP1Q01518 475 aa22.55■■□□□ 1.2
UPF1-209ENST00000600310 CTCFLQ8NI51 663 aaPredicted RBP22.55■■□□□ 1.2
UPF1-209ENST00000600310 CTDP1Q9Y5B0 961 aaPredicted RBP22.55■■□□□ 1.2
UPF1-209ENST00000600310 KLF18A0A0U1RQI7 1052 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 KIF5BP33176 963 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 PSMC4P43686 418 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 RCAN1P53805 252 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 OAZ1P54368 228 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 FCGRTP55899 365 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 EVCP57679 992 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 TOB2Q14106 344 aaPredicted RBP22.54■■□□□ 1.2
UPF1-209ENST00000600310 PLS1Q14651 629 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 ARHGEF6Q15052 776 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 KIF2CQ99661 725 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 MOV10L1Q9BXT6 1211 aaKnown RBP22.54■■□□□ 1.2
UPF1-209ENST00000600310 ARHGAP39Q9C0H5 1083 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 PORCNQ9H237 461 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 ALDH8A1Q9H2A2 487 aaPredicted RBP22.54■■□□□ 1.2
UPF1-209ENST00000600310 RANBP17Q9H2T7 1088 aaKnown RBP22.54■■□□□ 1.2
UPF1-209ENST00000600310 A0A0G2JMZ2 1700 aa22.54■■□□□ 1.2
UPF1-209ENST00000600310 ZBTB43O43298 467 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 RXRAP19793 462 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 MAPK4P31152 587 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 STAT3P40763 770 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 APOBRQ0VD83 1088 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 MICU3Q86XE3 530 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 RIOX2Q8IUF8 465 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 FANCBQ8NB91 859 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 SHCBP1Q8NEM2 672 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 TRIM47Q96LD4 638 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 TEX13BQ9BXU2 312 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 CPVLQ9H3G5 476 aa22.53■■□□□ 1.2
UPF1-209ENST00000600310 FMNL1O95466 1100 aaPredicted RBP22.52■■□□□ 1.2
UPF1-209ENST00000600310 GNRH1P01148 92 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 GNAQP50148 359 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 RAB11FIP4Q86YS3 637 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 ADGRF4Q8IZF3 695 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 CPXCR1Q8N123 301 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 TBC1D32Q96NH3 1257 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 EFCC1Q9HA90 598 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 RAVER2Q9HCJ3 691 aaKnown RBP22.52■■□□□ 1.2
UPF1-209ENST00000600310 ZNF536O15090 1300 aa22.52■■□□□ 1.2
UPF1-209ENST00000600310 ECM2O94769 699 aaPredicted RBP22.51■■□□□ 1.19
UPF1-209ENST00000600310 SLC25A27O95847 323 aa22.51■■□□□ 1.19
UPF1-209ENST00000600310 SMARCA1P28370 1054 aa22.51■■□□□ 1.19
UPF1-209ENST00000600310 COPB2P35606 906 aa22.51■■□□□ 1.19
UPF1-209ENST00000600310 SNAP25P60880 206 aa22.51■■□□□ 1.19
UPF1-209ENST00000600310 CCAR1Q8IX12 1150 aaKnown RBP22.51■■□□□ 1.19
UPF1-209ENST00000600310 ABHD8Q96I13 439 aa22.51■■□□□ 1.19
UPF1-209ENST00000600310 LZTS2Q9BRK4 669 aa22.51■■□□□ 1.19
UPF1-209ENST00000600310 TNPO2O14787 897 aaKnown RBP22.5■■□□□ 1.19
UPF1-209ENST00000600310 ERCC3P19447 782 aa22.5■■□□□ 1.19
UPF1-209ENST00000600310 NEK4P51957 841 aa22.5■■□□□ 1.19
UPF1-209ENST00000600310 SLC35G1Q2M3R5 365 aa22.5■■□□□ 1.19
UPF1-209ENST00000600310 SNRNP48Q6IEG0 339 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms