RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 INTS13Q9NVM9 706 aa24.56■■□□□ 1.52
GRAMD1A-212ENST00000600231 COL11A2P13942 1736 aaPredicted RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 ERCC5P28715 1186 aaPredicted RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 LONP1P36776 959 aaKnown RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 PDXDC2PQ6P474 469 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 RRP36Q96EU6 259 aaKnown RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 MTRQ99707 1265 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 DBNDD1Q9H9R9 158 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 PDHBP11177 359 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 CD44P16070 742 aaKnown RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 CDC42EP5Q6NZY7 148 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 CLEC10AQ8IUN9 316 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 VSTM4Q8IW00 320 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 PIGSQ96S52 555 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 SAMSN1Q9NSI8 373 aaKnown RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 TRMT1Q9NXH9 659 aaKnown RBP24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 SERPINB13Q9UIV8 391 aa24.55■■□□□ 1.52
GRAMD1A-212ENST00000600231 CDK11BP21127 795 aaKnown RBP24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 EIF6P56537 245 aaKnown RBP24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 APOBEC3HQ6NTF7 200 aaKnown RBP24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 BLZF1Q9H2G9 400 aa24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 SMARCA1P28370 1054 aa24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 KLHL10Q6JEL2 608 aa24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 SMYD4Q8IYR2 804 aaPredicted RBP24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 LRRC47Q8N1G4 583 aaKnown RBP24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 PLIN4Q96Q06 1357 aa24.54■■□□□ 1.52
GRAMD1A-212ENST00000600231 SMCO2A6NFE2 343 aa24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 RBM10P98175 930 aaKnown RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 HHIPL2Q6UWX4 724 aa24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 FAM177A1Q8N128 213 aaPredicted RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 CCAR2Q8N163 923 aaKnown RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 TEKT1Q969V4 418 aa24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 SEC63Q9UGP8 760 aaKnown RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 FRMPD2Q68DX3 1309 aaPredicted RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 RIOK3O14730 519 aaKnown RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 GTF2F1P35269 517 aaKnown RBP eCLIP24.53■■□□□ 1.521e-7■■■■■ 28.3
GRAMD1A-212ENST00000600231 ZNF772Q68DY9 489 aaPredicted RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 DTHD1Q6ZMT9 781 aa24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 CCDC12Q8WUD4 166 aaPredicted RBP24.53■■□□□ 1.52
GRAMD1A-212ENST00000600231 QSER1Q2KHR3 1735 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 CUL4BQ13620 913 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 TSC1Q92574 1164 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 PYM1Q9BRP8 204 aaKnown RBP24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 IGKV6D-41A0A0C4DH26 115 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 NFIAQ12857 509 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 KARSQ15046 597 aaKnown RBP24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 RIOX1Q9H6W3 641 aa24.52■■□□□ 1.52
GRAMD1A-212ENST00000600231 STX17P56962 302 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 DHX8Q14562 1220 aaKnown RBP24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 PODNQ7Z5L7 613 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 C6orf50Q9HD87 102 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 PP2D1A8MPX8 630 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 PPP1R3GB7ZBB8 358 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 GNA11P29992 359 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 CT47A1Q5JQC4 288 aaPredicted RBP24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 C2CD5Q86YS7 1000 aa24.51■■□□□ 1.51
GRAMD1A-212ENST00000600231 SLURP2P0DP57 97 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 SHMT1P34896 483 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 TXLNAP40222 546 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 E4F1Q66K89 784 aaPredicted RBP24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 KCND1Q9NSA2 647 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 MYH8P13535 1937 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 CRKP46108 304 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 NYAP1Q6ZVC0 841 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 SWAP70Q9UH65 585 aa24.5■■□□□ 1.51
GRAMD1A-212ENST00000600231 GTPBP6O43824 516 aaPredicted RBP24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 SOGA3Q5TF21 947 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 SPATA1Q5VX52 437 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 KRT25Q7Z3Z0 450 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 PCDHAC2Q9Y5I4 1007 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 TTLL1O95922 423 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 GOLGA8FQ08AF8 430 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 GOLGA8DPQ0D2H9 430 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 NONOQ15233 471 aaKnown RBP eCLIP24.49■■□□□ 1.513e-9■■■□□ 17.9
GRAMD1A-212ENST00000600231 PTPN14Q15678 1187 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 LETM2Q2VYF4 491 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 KIAA0825Q8IV33 1275 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 ZFPM1Q8IX07 1006 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 DISC1Q9NRI5 854 aa24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 ZNF219Q9P2Y4 722 aaPredicted RBP24.49■■□□□ 1.51
GRAMD1A-212ENST00000600231 SNHG28P0DPA3 235 aa24.48■■□□□ 1.51
GRAMD1A-212ENST00000600231 STAT6P42226 847 aa24.48■■□□□ 1.51
GRAMD1A-212ENST00000600231 SYNRGQ9UMZ2 1314 aa24.48■■□□□ 1.51
GRAMD1A-212ENST00000600231 ASPRV1Q53RT3 343 aa24.48■■□□□ 1.51
GRAMD1A-212ENST00000600231 NAALADL2Q58DX5 795 aa24.48■■□□□ 1.51
GRAMD1A-212ENST00000600231 CEP135Q66GS9 1140 aa24.48■■□□□ 1.51
GRAMD1A-212ENST00000600231 LAD1O00515 517 aa24.47■■□□□ 1.51
GRAMD1A-212ENST00000600231 NRDCO43847 1150 aa24.47■■□□□ 1.51
GRAMD1A-212ENST00000600231 CCNT1O60563 726 aaKnown RBP24.47■■□□□ 1.51
GRAMD1A-212ENST00000600231 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
GRAMD1A-212ENST00000600231 GPCPD1Q9NPB8 672 aa24.47■■□□□ 1.51
GRAMD1A-212ENST00000600231 BIN2Q9UBW5 565 aaPredicted RBP24.47■■□□□ 1.51
GRAMD1A-212ENST00000600231 H0YIN7 160 aa24.46■■□□□ 1.51
GRAMD1A-212ENST00000600231 UBA7P41226 1012 aa24.46■■□□□ 1.51
GRAMD1A-212ENST00000600231 CACNB3P54284 484 aa24.46■■□□□ 1.51
GRAMD1A-212ENST00000600231 ZNF592Q92610 1267 aa24.46■■□□□ 1.51
GRAMD1A-212ENST00000600231 HLA-DOAP06340 250 aa24.46■■□□□ 1.51
GRAMD1A-212ENST00000600231 PRPHP41219 470 aa24.46■■□□□ 1.51
GRAMD1A-212ENST00000600231 JAKMIP3Q5VZ66 844 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms