RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 STAT3P40763 770 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 ANTXR2P58335 489 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 SNAP25P60880 206 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 CPXCR1Q8N123 301 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 PNMA1Q8ND90 353 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 SHCBP1Q8NEM2 672 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 CHURC1Q8WUH1 139 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 USP6NLQ92738 828 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 ZNF333Q96JL9 665 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 NUDT12Q9BQG2 462 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 SLC38A10Q9HBR0 1119 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 SENP2Q9HC62 589 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 RAVER2Q9HCJ3 691 aaKnown RBP17.86■□□□□ 0.45
LIG1-219ENST00000600055 IFIT3O14879 490 aaKnown RBP17.85■□□□□ 0.45
LIG1-219ENST00000600055 PLA2G6O60733 806 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 SNHG28P0DPA3 235 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 SLC4A3P48751 1232 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 SOX10P56693 466 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 IFIT1BQ5T764 474 aaKnown RBP17.85■□□□□ 0.45
LIG1-219ENST00000600055 NBPF11Q86T75 865 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 RIOX2Q8IUF8 465 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 PRR12Q9ULL5 1215 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 RIPK3Q9Y572 518 aa17.85■□□□□ 0.45
LIG1-219ENST00000600055 CTDP1Q9Y5B0 961 aaPredicted RBP17.85■□□□□ 0.45
LIG1-219ENST00000600055 SLC15A5A6NIM6 579 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 GOLGA8HP0CJ92 632 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 ZNF543Q08ER8 600 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 MTFR1Q15390 333 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 SNRNP48Q6IEG0 339 aaKnown RBP17.84■□□□□ 0.45
LIG1-219ENST00000600055 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 SLAIN1Q8ND83 568 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 MROH8Q9H579 483 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 BIN2Q9UBW5 565 aaPredicted RBP17.84■□□□□ 0.45
LIG1-219ENST00000600055 IVNS1ABPQ9Y6Y0 642 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 PLXNB2O15031 1838 aa17.84■□□□□ 0.45
LIG1-219ENST00000600055 SLC25A27O95847 323 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 RGS2P41220 211 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 TRIM32Q13049 653 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 MAP2K5Q13163 448 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 GRB14Q14449 540 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 CCL14Q16627 93 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 CCDC174Q6PII3 467 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 BTNL9Q6UXG8 535 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 IGDCC4Q8TDY8 1250 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 PXYLP1Q8TE99 480 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 TEX13BQ9BXU2 312 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 CPVLQ9H3G5 476 aa17.83■□□□□ 0.44
LIG1-219ENST00000600055 GPHNQ9NQX3 736 aaPredicted RBP17.83■□□□□ 0.44
LIG1-219ENST00000600055 COL11A1P12107 1806 aaPredicted RBP17.83■□□□□ 0.44
LIG1-219ENST00000600055 ZNF536O15090 1300 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 ATP2A1O14983 1001 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 PRC1O43663 620 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 INHAP05111 366 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 TAL1P17542 331 aaPredicted RBP17.82■□□□□ 0.44
LIG1-219ENST00000600055 ADORA2AP29274 412 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 TMEM67Q5HYA8 995 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 SYDE2Q5VT97 1194 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 RNF20Q5VTR2 975 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 NPLOC4Q8TAT6 608 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 TRIB2Q92519 343 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 AGBL1Q96MI9 1066 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
LIG1-219ENST00000600055 ERICH2A1L162 156 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 POTEFA5A3E0 1075 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 STRNO43815 780 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 COBLO75128 1261 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 FDX1P10109 184 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 WTAPQ15007 396 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 APBA2Q99767 749 aa17.81■□□□□ 0.44
LIG1-219ENST00000600055 REC8O95072 547 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 XRCC5P13010 732 aaKnown RBP17.8■□□□□ 0.44
LIG1-219ENST00000600055 MCM5P33992 734 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 OAZ1P54368 228 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 UBXN2AP68543 259 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
LIG1-219ENST00000600055 TSGA10IPQ3SY00 556 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
LIG1-219ENST00000600055 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 MMP19Q99542 508 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 LRRC2Q9BYS8 371 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 RANBP17Q9H2T7 1088 aaKnown RBP17.8■□□□□ 0.44
LIG1-219ENST00000600055 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 HOMER2Q9NSB8 354 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 FLRT1Q9NZU1 646 aa17.8■□□□□ 0.44
LIG1-219ENST00000600055 CENPFP49454 3210 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 HMGCRP04035 888 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 PGK2P07205 417 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 PARP1P09874 1014 aaKnown RBP17.79■□□□□ 0.44
LIG1-219ENST00000600055 FCER1AP12319 257 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 CCL5P13501 91 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
LIG1-219ENST00000600055 HSPA4P34932 840 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 COPB2P35606 906 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 ASPRV1Q53RT3 343 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 DPP9Q86TI2 863 aa17.79■□□□□ 0.44
LIG1-219ENST00000600055 ABRAQ8N0Z2 381 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms