RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 PHF24Q9UPV7 400 aa16.38■□□□□ 0.21
IRF3-225ENST00000600022 SNAI1O95863 264 aaPredicted RBP16.37■□□□□ 0.21
IRF3-225ENST00000600022 KCTD2Q14681 263 aa16.37■□□□□ 0.21
IRF3-225ENST00000600022 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.37■□□□□ 0.218e-8■■■□□ 16.6
IRF3-225ENST00000600022 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
IRF3-225ENST00000600022 MYH8P13535 1937 aa16.37■□□□□ 0.21
IRF3-225ENST00000600022 A0A1W2PQ45 241 aaPredicted RBP16.36■□□□□ 0.21
IRF3-225ENST00000600022 A0A1W2PQY0 241 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 MYADML2A6NDP7 307 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 F5H6K3 240 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 ADCY6O43306 1168 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 PRDM1O75626 825 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 RARBP10826 455 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 KLRC3Q07444 240 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 ZNF697Q5TEC3 545 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 C1orf53Q5VUE5 145 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 GOPCQ9HD26 462 aa16.36■□□□□ 0.21
IRF3-225ENST00000600022 PQBP1O60828 265 aaKnown RBP16.35■□□□□ 0.21
IRF3-225ENST00000600022 ADAMTS4O75173 837 aa16.35■□□□□ 0.21
IRF3-225ENST00000600022 NDUFB10O96000 172 aa16.35■□□□□ 0.21
IRF3-225ENST00000600022 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
IRF3-225ENST00000600022 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
IRF3-225ENST00000600022 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
IRF3-225ENST00000600022 EPB41L4AQ9HCS5 686 aaPredicted RBP16.35■□□□□ 0.21
IRF3-225ENST00000600022 CLIP2Q9UDT6 1046 aa16.35■□□□□ 0.21
IRF3-225ENST00000600022 DIS3Q9Y2L1 958 aaKnown RBP16.35■□□□□ 0.21
IRF3-225ENST00000600022 DNAJC25-GNG10A0A024R161 153 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 M0R2C6 588 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 FAAP100Q0VG06 881 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 SBK1Q52WX2 424 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
IRF3-225ENST00000600022 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 FGD4Q96M96 766 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 SLF1Q9BQI6 1058 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
IRF3-225ENST00000600022 TACC3Q9Y6A5 838 aa16.34■□□□□ 0.21
IRF3-225ENST00000600022 IGKV6D-41A0A0C4DH26 115 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 CLTBP09497 229 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 ACLYP53396 1101 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 KCNA10Q16322 511 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
IRF3-225ENST00000600022 RNF180Q86T96 592 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
IRF3-225ENST00000600022 LNPKQ9C0E8 428 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 MKNK2Q9HBH9 465 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
IRF3-225ENST00000600022 NRBP1Q9UHY1 535 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.2
IRF3-225ENST00000600022 SYNRGQ9UMZ2 1314 aa16.33■□□□□ 0.2
IRF3-225ENST00000600022 CHD9Q3L8U1 2897 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 AKR1A1P14550 325 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 PTGS1P23219 599 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 PDE4AP27815 886 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 KLHDC9Q8NEP7 349 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 KIFC2Q96AC6 838 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 PLXNA1Q9UIW2 1896 aa16.32■□□□□ 0.2
IRF3-225ENST00000600022 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 RNF113AO15541 343 aaKnown RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 GPAA1O43292 621 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 RAG1P15918 1043 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 SMAD3P84022 425 aaKnown RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 C16orf59Q7L2K0 433 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 CEP95Q96GE4 821 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 ZHX1Q9UKY1 873 aaPredicted RBP16.31■□□□□ 0.2
IRF3-225ENST00000600022 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 MYH7P12883 1935 aa16.31■□□□□ 0.2
IRF3-225ENST00000600022 MAMDC4Q6UXC1 1216 aa16.3■□□□□ 0.2
IRF3-225ENST00000600022 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
IRF3-225ENST00000600022 APPBP2Q92624 585 aa16.3■□□□□ 0.2
IRF3-225ENST00000600022 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
IRF3-225ENST00000600022 MTMR4Q9NYA4 1195 aa16.3■□□□□ 0.2
IRF3-225ENST00000600022 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
IRF3-225ENST00000600022 SALL3Q9BXA9 1300 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 CTAGE5O15320 804 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 APPP05067 770 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 SNAP25P60880 206 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 GRIN2CQ14957 1233 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 CCDC144BQ3MJ40 725 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 ANKRD33Q7Z3H0 272 aa16.29■□□□□ 0.2
IRF3-225ENST00000600022 MKL1Q969V6 931 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms