RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 IRX5P78411 483 aaPredicted RBP14.85□□□□□ -0.03
HOMER3-211ENST00000599808 TMEM240Q5SV17 173 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 FAM83BQ5T0W9 1011 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 C16orf86Q6ZW13 317 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.85□□□□□ -0.03
HOMER3-211ENST00000599808 PBX4Q9BYU1 374 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 GOPCQ9HD26 462 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 CHD7Q9P2D1 2997 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 FAM184BQ9ULE4 1060 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 SYNGAP1Q96PV0 1343 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 USP17L12C9JPN9 530 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 USP17L21D6R901 530 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 RAD21O60216 631 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 ADD2P35612 726 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 CDK7P50613 346 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 PPIGQ13427 754 aaKnown RBP eCLIP14.84□□□□□ -0.03
HOMER3-211ENST00000599808 RASIP1Q5U651 963 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 MAMDC4Q6UXC1 1216 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 MSL3Q8N5Y2 521 aaKnown RBP14.84□□□□□ -0.03
HOMER3-211ENST00000599808 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 GAS2L1Q99501 681 aaPredicted RBP14.84□□□□□ -0.03
HOMER3-211ENST00000599808 ZHX1Q9UKY1 873 aaPredicted RBP14.84□□□□□ -0.03
HOMER3-211ENST00000599808 REV3LO60673 3130 aa14.84□□□□□ -0.03
HOMER3-211ENST00000599808 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 ADCY6O43306 1168 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 DUSP11O75319 330 aaKnown RBP14.83□□□□□ -0.04
HOMER3-211ENST00000599808 CHGBP05060 677 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 CSF2RAP15509 400 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 HSP90AB4PQ58FF6 505 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 SNRNP48Q6IEG0 339 aaKnown RBP14.83□□□□□ -0.04
HOMER3-211ENST00000599808 CCDC129Q6ZRS4 1044 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
HOMER3-211ENST00000599808 GLT1D1Q96MS3 346 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 NUP88Q99567 741 aaPredicted RBP14.83□□□□□ -0.04
HOMER3-211ENST00000599808 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.83□□□□□ -0.04
HOMER3-211ENST00000599808 TEX13BQ9BXU2 312 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 PRDM12Q9H4Q4 367 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 RIPK3Q9Y572 518 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 ELP1O95163 1332 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 MROH7Q68CQ1 1323 aa14.83□□□□□ -0.04
HOMER3-211ENST00000599808 TCF20Q9UGU0 1960 aaKnown RBP14.82□□□□□ -0.04
HOMER3-211ENST00000599808 CCER2I3L3R5 266 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 APBB1O00213 710 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 ASGR1P07306 291 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 C6orf222P0C671 652 aaPredicted RBP14.82□□□□□ -0.04
HOMER3-211ENST00000599808 CST5P28325 142 aaPredicted RBP14.82□□□□□ -0.04
HOMER3-211ENST00000599808 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 ZNF365Q70YC5 407 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 ATXN2LQ8WWM7 1075 aaKnown RBP14.82□□□□□ -0.04
HOMER3-211ENST00000599808 DDX11Q96FC9 970 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 SLF1Q9BQI6 1058 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 PAG1Q9NWQ8 432 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 RAPGEFL1Q9UHV5 662 aa14.82□□□□□ -0.04
HOMER3-211ENST00000599808 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
HOMER3-211ENST00000599808 ACRP10323 421 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 ACVR2BQ13705 512 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 ADGRE1Q14246 886 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 CTR9Q6PD62 1173 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 CCDC174Q6PII3 467 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 PCSK9Q8NBP7 692 aaKnown RBP14.81□□□□□ -0.04
HOMER3-211ENST00000599808 KIF1BPQ96EK5 621 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 ASB2Q96Q27 587 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 PPP1R12CQ9BZL4 782 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 UPF3AQ9H1J1 476 aaKnown RBP14.81□□□□□ -0.04
HOMER3-211ENST00000599808 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.81□□□□□ -0.04
HOMER3-211ENST00000599808 THEGQ9P2T0 379 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
HOMER3-211ENST00000599808 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
HOMER3-211ENST00000599808 ARVCFO00192 962 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 GJA9P57773 515 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 CCDC144BQ3MJ40 725 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 PSRC1Q6PGN9 363 aaPredicted RBP14.8□□□□□ -0.04
HOMER3-211ENST00000599808 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
HOMER3-211ENST00000599808 FAM126BQ8IXS8 530 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 TMEM199Q8N511 208 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 ADAMTS19Q8TE59 1207 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 VTI1AQ96AJ9 217 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 DDRGK1Q96HY6 314 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 FGD4Q96M96 766 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 BOLA2Q9H3K6 86 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 SLC4A4Q9Y6R1 1079 aa14.8□□□□□ -0.04
HOMER3-211ENST00000599808 XIRP2A4UGR9 3374 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 ATP2A1O14983 1001 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 CTAGE5O15320 804 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 CYP2C18P33260 490 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 SLC4A3P48751 1232 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 CCDC85BQ15834 202 aaPredicted RBP14.79□□□□□ -0.04
HOMER3-211ENST00000599808 GNASQ5JWF2 1037 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 CPXCR1Q8N123 301 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 PRPF38AQ8NAV1 312 aaKnown RBP14.79□□□□□ -0.04
HOMER3-211ENST00000599808 PANK1Q8TE04 598 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.79□□□□□ -0.04
HOMER3-211ENST00000599808 ABHD16BQ9H3Z7 469 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 SPC25Q9HBM1 224 aa14.79□□□□□ -0.04
HOMER3-211ENST00000599808 CXXC1Q9P0U4 656 aaPredicted RBP14.79□□□□□ -0.04
HOMER3-211ENST00000599808 F5H6K3 240 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms