RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 MX2P20592 715 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 IRX4P78413 519 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
SCN8A-208ENST00000599343 IP6K1Q92551 441 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
SCN8A-208ENST00000599343 KDM3AQ9Y4C1 1321 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 STMN1P16949 149 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
SCN8A-208ENST00000599343 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 PDE11AQ9HCR9 933 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 HAUS2Q9NVX0 235 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 ATF2P15336 505 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 YWHAEP62258 255 aaKnown RBP12.98□□□□□ -0.33
SCN8A-208ENST00000599343 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-208ENST00000599343 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 K7ENM7 598 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 M0QZ92 97 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 BRD1O95696 1058 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 GLG1Q92896 1179 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-208ENST00000599343 C4orf50Q6ZRC1 276 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 SETSIPP0DME0 302 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 PDE6CP51160 858 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 HADHQ16836 314 aaKnown RBP12.98□□□□□ -0.33
SCN8A-208ENST00000599343 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 SYNJ2BP-COX16A0A087WUM0 186 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 EFCAB8A8MWE9 144 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 PPP2R5BQ15173 497 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 OTUD6AQ7L8S5 288 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 NLRX1Q86UT6 975 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 RNF169Q8NCN4 708 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 POMGNT1Q8WZA1 660 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 IQCDQ96DY2 449 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 COX16Q9P0S2 106 aa12.98□□□□□ -0.33
SCN8A-208ENST00000599343 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
SCN8A-208ENST00000599343 CAPN9O14815 690 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 CASP2P42575 452 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 CCT5P48643 541 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 LIG4P49917 911 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 MRPL46Q9H2W6 279 aaKnown RBP12.97□□□□□ -0.33
SCN8A-208ENST00000599343 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
SCN8A-208ENST00000599343 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
SCN8A-208ENST00000599343 GUCY2DQ02846 1103 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 NOSTRINQ8IVI9 506 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
SCN8A-208ENST00000599343 DSCC1Q9BVC3 393 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 MAD1L1Q9Y6D9 718 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 PTH1RQ03431 593 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 SNCBQ16143 134 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 MMEL1Q495T6 779 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 LRRC8CQ8TDW0 803 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 XAB2Q9HCS7 855 aaKnown RBP12.97□□□□□ -0.33
SCN8A-208ENST00000599343 BLIDQ8IZY5 108 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 NME8Q8N427 588 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 SMYD2Q9NRG4 433 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 FAF1Q9UNN5 650 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-208ENST00000599343 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 OATP04181 439 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 IFNAR2P48551 515 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 Q9H521 79 aa12.97□□□□□ -0.33
SCN8A-208ENST00000599343 RPSAP08865 295 aaKnown RBP12.96□□□□□ -0.33
SCN8A-208ENST00000599343 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 ARMCX3Q9UH62 379 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-208ENST00000599343 CUL7Q14999 1698 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 BFSP1Q12934 665 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 RCN2Q14257 317 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 GCKRQ14397 625 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
SCN8A-208ENST00000599343 C1orf112Q9NSG2 853 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 GOLGA8HP0CJ92 632 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 PTPN21Q16825 1174 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 SESTD1Q86VW0 696 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCN8A-208ENST00000599343 EEF2KMTQ96G04 330 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-208ENST00000599343 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
SCN8A-208ENST00000599343 ENC1O14682 589 aa12.96□□□□□ -0.34
SCN8A-208ENST00000599343 ARHGAP4P98171 946 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms