RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 EPB41L4AQ9HCS5 686 aaPredicted RBP17.41■□□□□ 0.38
EBI3-202ENST00000599339 PHF24Q9UPV7 400 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 IGKV6D-41A0A0C4DH26 115 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 PRDM1O75626 825 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 CPXCR1Q8N123 301 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 MKL1Q969V6 931 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 CEP95Q96GE4 821 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 NAPBQ9H115 298 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
EBI3-202ENST00000599339 FEM1BQ9UK73 627 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 STXBP5LQ9Y2K9 1186 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
EBI3-202ENST00000599339 MYH4Q9Y623 1939 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 ZNF865P0CJ78 1059 aaPredicted RBP17.39■□□□□ 0.37
EBI3-202ENST00000599339 FDX1P10109 184 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 GMCL1P1Q8NEA9 526 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 MTMR10Q9NXD2 777 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
EBI3-202ENST00000599339 SMCHD1A6NHR9 2005 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 LTBP2Q14767 1821 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 PGK1P00558 417 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
EBI3-202ENST00000599339 OAZ1P54368 228 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 FAM109BQ6ICB4 259 aaPredicted RBP17.38■□□□□ 0.37
EBI3-202ENST00000599339 LRRC47Q8N1G4 583 aaKnown RBP17.38■□□□□ 0.37
EBI3-202ENST00000599339 ANKRD35Q8N283 1001 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 NEDD1Q8NHV4 660 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 TSEN34Q9BSV6 310 aaKnown RBP17.38■□□□□ 0.37
EBI3-202ENST00000599339 SLC38A10Q9HBR0 1119 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 FAM184BQ9ULE4 1060 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
EBI3-202ENST00000599339 BMP3P12645 472 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 MX1P20591 662 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 TLE2Q04725 743 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 PPARAQ07869 468 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 ZMYM1Q5SVZ6 1142 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
EBI3-202ENST00000599339 CHST13Q8NET6 341 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 RAVER2Q9HCJ3 691 aaKnown RBP17.37■□□□□ 0.37
EBI3-202ENST00000599339 ZHX1Q9UKY1 873 aaPredicted RBP17.37■□□□□ 0.37
EBI3-202ENST00000599339 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
EBI3-202ENST00000599339 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
EBI3-202ENST00000599339 DNAJC25-GNG10A0A024R161 153 aa17.36■□□□□ 0.37
EBI3-202ENST00000599339 A0A1W2PQ45 241 aaPredicted RBP17.36■□□□□ 0.37
EBI3-202ENST00000599339 A0A1W2PQY0 241 aa17.36■□□□□ 0.37
EBI3-202ENST00000599339 TFAP4Q01664 338 aa17.36■□□□□ 0.37
EBI3-202ENST00000599339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.36■□□□□ 0.37
EBI3-202ENST00000599339 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
EBI3-202ENST00000599339 BADQ92934 168 aa17.36■□□□□ 0.37
EBI3-202ENST00000599339 SEC62Q99442 399 aaKnown RBP17.36■□□□□ 0.37
EBI3-202ENST00000599339 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
EBI3-202ENST00000599339 MOXD2PA6NHM9 499 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 CLTBP09497 229 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 STAT2P52630 851 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 ZNF697Q5TEC3 545 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 FAM160B2Q86V87 743 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 CHURC1Q8WUH1 139 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 ABHD16BQ9H3Z7 469 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 SPC25Q9HBM1 224 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 STARD7Q9NQZ5 370 aa17.35■□□□□ 0.37
EBI3-202ENST00000599339 TMEM232C9JQI7 657 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 POTEB2H3BUK9 544 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 DLL1O00548 723 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 PQBP1O60828 265 aaKnown RBP17.34■□□□□ 0.37
EBI3-202ENST00000599339 ADAMTS4O75173 837 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 DUSP11O75319 330 aaKnown RBP17.34■□□□□ 0.37
EBI3-202ENST00000599339 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
EBI3-202ENST00000599339 COL6A3P12111 3177 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 SLC1A4P43007 532 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 IKQ13123 557 aaPredicted RBP17.34■□□□□ 0.37
EBI3-202ENST00000599339 SHHQ15465 462 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 SH3RF1Q7Z6J0 888 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
EBI3-202ENST00000599339 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.34■□□□□ 0.37
EBI3-202ENST00000599339 SYNRGQ9UMZ2 1314 aa17.34■□□□□ 0.37
EBI3-202ENST00000599339 TRIM43BA6NCK2 446 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 TSPY2A6NKD2 308 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 RAG1P15918 1043 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 ACLYP53396 1101 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 ACVR2BQ13705 512 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.36
EBI3-202ENST00000599339 TRIM43Q96BQ3 446 aaPredicted RBP17.33■□□□□ 0.36
EBI3-202ENST00000599339 LENG1Q96BZ8 264 aaPredicted RBP17.33■□□□□ 0.36
EBI3-202ENST00000599339 GMCL1Q96IK5 515 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 TOX2Q96NM4 488 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 STX8Q9UNK0 236 aa17.33■□□□□ 0.36
EBI3-202ENST00000599339 DCDC2CA8MYV0 355 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms