RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 LHX8Q68G74 356 aa23.43■■□□□ 1.34
ARHGEF1-217ENST00000598812 ZNF589Q86UQ0 364 aaPredicted RBP23.43■■□□□ 1.34
ARHGEF1-217ENST00000598812 KIFC2Q96AC6 838 aa23.43■■□□□ 1.34
ARHGEF1-217ENST00000598812 INCENPQ9NQS7 918 aa23.43■■□□□ 1.34
ARHGEF1-217ENST00000598812 FEM1BQ9UK73 627 aa23.43■■□□□ 1.34
ARHGEF1-217ENST00000598812 ZBED4O75132 1171 aa23.42■■□□□ 1.34
ARHGEF1-217ENST00000598812 SDSP20132 328 aa23.42■■□□□ 1.34
ARHGEF1-217ENST00000598812 MNX1P50219 401 aaPredicted RBP23.42■■□□□ 1.34
ARHGEF1-217ENST00000598812 TOMM22Q9NS69 142 aa23.42■■□□□ 1.34
ARHGEF1-217ENST00000598812 DDX20Q9UHI6 824 aaKnown RBP23.42■■□□□ 1.34
ARHGEF1-217ENST00000598812 ZMYM6O95789 1325 aa23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 ORC4O43929 436 aa23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 IGHA2P01877 340 aa23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 BMP3P12645 472 aa23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 SNRNP48Q6IEG0 339 aaKnown RBP23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 MAML3Q96JK9 1138 aa23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 DIAPH3Q9NSV4 1193 aa23.41■■□□□ 1.34
ARHGEF1-217ENST00000598812 COL6A3P12111 3177 aa23.4■■□□□ 1.34
ARHGEF1-217ENST00000598812 CYBAP13498 195 aa23.4■■□□□ 1.34
ARHGEF1-217ENST00000598812 SLC1A4P43007 532 aa23.4■■□□□ 1.34
ARHGEF1-217ENST00000598812 CPXCR1Q8N123 301 aa23.4■■□□□ 1.34
ARHGEF1-217ENST00000598812 ZNFX1Q9P2E3 1918 aaKnown RBP23.39■■□□□ 1.34
ARHGEF1-217ENST00000598812 HIP1O00291 1037 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 NMT2O60551 498 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 PGK2P07205 417 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 FGRP09769 529 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 SLC4A3P48751 1232 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 IRX6P78412 446 aaPredicted RBP23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 IKQ13123 557 aaPredicted RBP23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 RRP12Q5JTH9 1297 aaKnown RBP23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 TRPV1Q8NER1 839 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 GMCL1Q96IK5 515 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 IL17RBQ9NRM6 502 aa23.39■■□□□ 1.33
ARHGEF1-217ENST00000598812 TMEM232C9JQI7 657 aa23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 ATP2A1O14983 1001 aa23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 STAT2P52630 851 aa23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 CWC27Q6UX04 472 aaKnown RBP23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 SLC38A10Q9HBR0 1119 aa23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 TACC3Q9Y6A5 838 aa23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 FRMPD3Q5JV73 1810 aa23.38■■□□□ 1.33
ARHGEF1-217ENST00000598812 FDX1P10109 184 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 MCCP23508 829 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 HAND2P61296 217 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 FAM160B2Q86V87 743 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 SLC17A8Q8NDX2 589 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 CHURC1Q8WUH1 139 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 CHMP4CQ96CF2 233 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 RAVER2Q9HCJ3 691 aaKnown RBP23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 DIS3Q9Y2L1 958 aaKnown RBP23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 ALPK3Q96L96 1907 aa23.37■■□□□ 1.33
ARHGEF1-217ENST00000598812 SEPT4O43236 478 aa23.36■■□□□ 1.33
ARHGEF1-217ENST00000598812 OAZ1P54368 228 aa23.36■■□□□ 1.33
ARHGEF1-217ENST00000598812 ZNF792Q3KQV3 632 aa23.36■■□□□ 1.33
ARHGEF1-217ENST00000598812 C7orf61Q8IZ16 206 aa23.36■■□□□ 1.33
ARHGEF1-217ENST00000598812 DDX11Q96FC9 970 aa23.36■■□□□ 1.33
ARHGEF1-217ENST00000598812 RIPK3Q9Y572 518 aa23.36■■□□□ 1.33
ARHGEF1-217ENST00000598812 PFASO15067 1338 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 PCP11498 1178 aaKnown RBP23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 COL6A1P12109 1028 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 PRAMEF19Q5SWL8 479 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 MFSD6Q6ZSS7 791 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 TINF2Q9BSI4 451 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 FBXO40Q9UH90 709 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 MTMR7Q9Y216 660 aa23.35■■□□□ 1.33
ARHGEF1-217ENST00000598812 PLXNA1Q9UIW2 1896 aa23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 LAMA3Q16787 3333 aa23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 AKNAD1Q5T1N1 836 aa23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 RCSD1Q6JBY9 416 aa23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 KCTD1Q719H9 257 aa23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 RNF41Q9H4P4 317 aaPredicted RBP23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 NRBP1Q9UHY1 535 aa23.34■■□□□ 1.33
ARHGEF1-217ENST00000598812 DNM1LO00429 736 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 NOVP48745 357 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 CCDC96Q2M329 555 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 ANO1Q5XXA6 986 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 ARRDC4Q8NCT1 418 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 CHST13Q8NET6 341 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 TCP11L1Q9NUJ3 509 aa23.33■■□□□ 1.33
ARHGEF1-217ENST00000598812 ZNF213O14771 459 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 PLA2G6O60733 806 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 TOP1P11387 765 aaKnown RBP23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 TBC1D10CQ8IV04 446 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 ANKRD35Q8N283 1001 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 DCAF4Q8WV16 495 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 SENP6Q9GZR1 1112 aaPredicted RBP23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 HOMER2Q9NSB8 354 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 CNPY2Q9Y2B0 182 aa23.32■■□□□ 1.32
ARHGEF1-217ENST00000598812 MYCNP04198 464 aaPredicted RBP23.31■■□□□ 1.32
ARHGEF1-217ENST00000598812 PDE4AP27815 886 aa23.31■■□□□ 1.32
ARHGEF1-217ENST00000598812 MSL3Q8N5Y2 521 aaKnown RBP23.31■■□□□ 1.32
ARHGEF1-217ENST00000598812 TMEM47Q9BQJ4 181 aa23.31■■□□□ 1.32
ARHGEF1-217ENST00000598812 ZMYND8Q9ULU4 1186 aaPredicted RBP23.31■■□□□ 1.32
ARHGEF1-217ENST00000598812 DNAJC25-GNG10A0A024R161 153 aa23.3■■□□□ 1.32
ARHGEF1-217ENST00000598812 KBTBD13C9JR72 458 aa23.3■■□□□ 1.32
ARHGEF1-217ENST00000598812 SOX1O00570 391 aaPredicted RBP23.3■■□□□ 1.32
ARHGEF1-217ENST00000598812 GJC2Q5T442 439 aaPredicted RBP23.3■■□□□ 1.32
ARHGEF1-217ENST00000598812 TTC22Q5TAA0 569 aa23.3■■□□□ 1.32
ARHGEF1-217ENST00000598812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.3■■□□□ 1.32
ARHGEF1-217ENST00000598812 RASGRP2Q7LDG7 609 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms