RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 CYBAP13498 195 aa27.27■■□□□ 1.96
SSBP4-205ENST00000598159 MAML3Q96JK9 1138 aa27.27■■□□□ 1.96
SSBP4-205ENST00000598159 RANBP6O60518 1105 aaKnown RBP27.26■■□□□ 1.95
SSBP4-205ENST00000598159 FDX1P10109 184 aa27.26■■□□□ 1.95
SSBP4-205ENST00000598159 TRPV1Q8NER1 839 aa27.26■■□□□ 1.95
SSBP4-205ENST00000598159 KIFC2Q96AC6 838 aa27.26■■□□□ 1.95
SSBP4-205ENST00000598159 CEP290O15078 2479 aa27.26■■□□□ 1.95
SSBP4-205ENST00000598159 ZMYM6O95789 1325 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 CCDC171Q6TFL3 1326 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 COL6A1P12109 1028 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 SNRNP48Q6IEG0 339 aaKnown RBP27.25■■□□□ 1.95
SSBP4-205ENST00000598159 ZNF589Q86UQ0 364 aaPredicted RBP27.25■■□□□ 1.95
SSBP4-205ENST00000598159 CHURC1Q8WUH1 139 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 GMCL1Q96IK5 515 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 SLC38A10Q9HBR0 1119 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 IL17RBQ9NRM6 502 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 STX8Q9UNK0 236 aa27.25■■□□□ 1.95
SSBP4-205ENST00000598159 ZNF792Q3KQV3 632 aa27.24■■□□□ 1.95
SSBP4-205ENST00000598159 CHRDL2Q6WN34 429 aa27.24■■□□□ 1.95
SSBP4-205ENST00000598159 CPXCR1Q8N123 301 aa27.24■■□□□ 1.95
SSBP4-205ENST00000598159 TACC3Q9Y6A5 838 aa27.24■■□□□ 1.95
SSBP4-205ENST00000598159 HIP1O00291 1037 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 PGK2P07205 417 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 SLC1A4P43007 532 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 OAZ1P54368 228 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 FAM160B2Q86V87 743 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 STAG1Q8WVM7 1258 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 NRBP1Q9UHY1 535 aa27.23■■□□□ 1.95
SSBP4-205ENST00000598159 PFASO15067 1338 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 ALPK3Q96L96 1907 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 TMEM232C9JQI7 657 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 SEPT4O43236 478 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 PLA2G6O60733 806 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 MCCP23508 829 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 NOVP48745 357 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 STAT2P52630 851 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 DDX11Q96FC9 970 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 RAVER2Q9HCJ3 691 aaKnown RBP27.22■■□□□ 1.95
SSBP4-205ENST00000598159 TOMM22Q9NS69 142 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 RIPK3Q9Y572 518 aa27.22■■□□□ 1.95
SSBP4-205ENST00000598159 NMT2O60551 498 aa27.21■■□□□ 1.95
SSBP4-205ENST00000598159 PCP11498 1178 aaKnown RBP27.21■■□□□ 1.95
SSBP4-205ENST00000598159 PRAMEF19Q5SWL8 479 aa27.21■■□□□ 1.95
SSBP4-205ENST00000598159 RCSD1Q6JBY9 416 aa27.21■■□□□ 1.95
SSBP4-205ENST00000598159 ARRDC4Q8NCT1 418 aa27.21■■□□□ 1.95
SSBP4-205ENST00000598159 TINF2Q9BSI4 451 aa27.21■■□□□ 1.95
SSBP4-205ENST00000598159 TCP11L1Q9NUJ3 509 aa27.21■■□□□ 1.95
SSBP4-205ENST00000598159 SLC4A3P48751 1232 aa27.2■■□□□ 1.94
SSBP4-205ENST00000598159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.2■■□□□ 1.948e-7■■■■□ 26.7
SSBP4-205ENST00000598159 C7orf61Q8IZ16 206 aa27.2■■□□□ 1.94
SSBP4-205ENST00000598159 CHST13Q8NET6 341 aa27.2■■□□□ 1.94
SSBP4-205ENST00000598159 DIAPH3Q9NSV4 1193 aa27.2■■□□□ 1.94
SSBP4-205ENST00000598159 RBM27Q9P2N5 1060 aaKnown RBP27.2■■□□□ 1.94
SSBP4-205ENST00000598159 FBXO40Q9UH90 709 aa27.2■■□□□ 1.94
SSBP4-205ENST00000598159 ISY1Q9ULR0 285 aaKnown RBP27.2■■□□□ 1.94
SSBP4-205ENST00000598159 FRMPD3Q5JV73 1810 aa27.2■■□□□ 1.94
SSBP4-205ENST00000598159 PLXNA1Q9UIW2 1896 aa27.19■■□□□ 1.94
SSBP4-205ENST00000598159 DNM1LO00429 736 aa27.19■■□□□ 1.94
SSBP4-205ENST00000598159 RRP12Q5JTH9 1297 aaKnown RBP27.19■■□□□ 1.94
SSBP4-205ENST00000598159 CWC27Q6UX04 472 aaKnown RBP27.19■■□□□ 1.94
SSBP4-205ENST00000598159 MFSD6Q6ZSS7 791 aa27.19■■□□□ 1.94
SSBP4-205ENST00000598159 MSL3Q8N5Y2 521 aaKnown RBP27.19■■□□□ 1.94
SSBP4-205ENST00000598159 IKQ13123 557 aaPredicted RBP27.18■■□□□ 1.94
SSBP4-205ENST00000598159 AKNAD1Q5T1N1 836 aa27.18■■□□□ 1.94
SSBP4-205ENST00000598159 SENP6Q9GZR1 1112 aaPredicted RBP27.18■■□□□ 1.94
SSBP4-205ENST00000598159 PRO3102Q9H379 93 aa27.18■■□□□ 1.94
SSBP4-205ENST00000598159 DNAJC25-GNG10A0A024R161 153 aa27.17■■□□□ 1.94
SSBP4-205ENST00000598159 HAND2P61296 217 aa27.17■■□□□ 1.94
SSBP4-205ENST00000598159 RNF41Q9H4P4 317 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-205ENST00000598159 SMCHD1A6NHR9 2005 aa27.17■■□□□ 1.94
SSBP4-205ENST00000598159 ZNF213O14771 459 aa27.16■■□□□ 1.94
SSBP4-205ENST00000598159 TOP1P11387 765 aaKnown RBP27.16■■□□□ 1.94
SSBP4-205ENST00000598159 KCTD1Q719H9 257 aa27.16■■□□□ 1.94
SSBP4-205ENST00000598159 ANKRD35Q8N283 1001 aa27.16■■□□□ 1.94
SSBP4-205ENST00000598159 DCAF4Q8WV16 495 aa27.16■■□□□ 1.94
SSBP4-205ENST00000598159 TTC14Q96N46 770 aa27.16■■□□□ 1.94
SSBP4-205ENST00000598159 NT5C2P49902 561 aa27.15■■□□□ 1.94
SSBP4-205ENST00000598159 FXR1P51114 621 aaKnown RBP eCLIP27.15■■□□□ 1.94
SSBP4-205ENST00000598159 MAMDC4Q6UXC1 1216 aa27.15■■□□□ 1.94
SSBP4-205ENST00000598159 ZNF467Q7Z7K2 595 aaPredicted RBP27.15■■□□□ 1.94
SSBP4-205ENST00000598159 CHMP4CQ96CF2 233 aa27.15■■□□□ 1.94
SSBP4-205ENST00000598159 LRRC26Q2I0M4 334 aa27.14■■□□□ 1.94
SSBP4-205ENST00000598159 TKFCQ3LXA3 575 aa27.14■■□□□ 1.94
SSBP4-205ENST00000598159 GJC2Q5T442 439 aaPredicted RBP27.14■■□□□ 1.94
SSBP4-205ENST00000598159 ANO1Q5XXA6 986 aa27.14■■□□□ 1.94
SSBP4-205ENST00000598159 TMEM47Q9BQJ4 181 aa27.14■■□□□ 1.94
SSBP4-205ENST00000598159 CNPY2Q9Y2B0 182 aa27.14■■□□□ 1.94
SSBP4-205ENST00000598159 A0A1W2PPC1 479 aa27.13■■□□□ 1.93
SSBP4-205ENST00000598159 KBTBD13C9JR72 458 aa27.13■■□□□ 1.93
SSBP4-205ENST00000598159 DSCC1Q9BVC3 393 aa27.13■■□□□ 1.93
SSBP4-205ENST00000598159 PRR12Q9ULL5 1215 aa27.13■■□□□ 1.93
SSBP4-205ENST00000598159 ZMYND8Q9ULU4 1186 aaPredicted RBP27.13■■□□□ 1.93
SSBP4-205ENST00000598159 MTMR7Q9Y216 660 aa27.13■■□□□ 1.93
SSBP4-205ENST00000598159 SYNGAP1Q96PV0 1343 aa27.13■■□□□ 1.93
SSBP4-205ENST00000598159 ZNF865P0CJ78 1059 aaPredicted RBP27.12■■□□□ 1.93
SSBP4-205ENST00000598159 RARBP10826 455 aa27.12■■□□□ 1.93
SSBP4-205ENST00000598159 IRX6P78412 446 aaPredicted RBP27.12■■□□□ 1.93
SSBP4-205ENST00000598159 ESR2Q92731 530 aa27.12■■□□□ 1.93
SSBP4-205ENST00000598159 ACAD9Q9H845 621 aa27.12■■□□□ 1.93
SSBP4-205ENST00000598159 ZNF536O15090 1300 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms