RNA–Protein interactions for RNA: ENST00000597626.5

LINC00649-209, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 612 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-209ENST00000597626 NUP133Q8WUM0 1156 aa11.38□□□□□ -0.59
LINC00649-209ENST00000597626 MKL1Q969V6 931 aa11.38□□□□□ -0.59
LINC00649-209ENST00000597626 TRIM43Q96BQ3 446 aaPredicted RBP11.38□□□□□ -0.59
LINC00649-209ENST00000597626 FAM161BQ96MY7 647 aa11.38□□□□□ -0.59
LINC00649-209ENST00000597626 NUP88Q99567 741 aaPredicted RBP11.38□□□□□ -0.59
LINC00649-209ENST00000597626 TSEN34Q9BSV6 310 aaKnown RBP11.38□□□□□ -0.59
LINC00649-209ENST00000597626 SYNPO2Q9UMS6 1093 aa11.38□□□□□ -0.59
LINC00649-209ENST00000597626 SYNGAP1Q96PV0 1343 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 MYH7P12883 1935 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 TTLL1O95922 423 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 FDX1P10109 184 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 RAG1P15918 1043 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 SMAD3P84022 425 aaKnown RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 C9orf50Q5SZB4 431 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 MAMDC4Q6UXC1 1216 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 SH3RF1Q7Z6J0 888 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 IFNL3Q8IZI9 196 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 KIFC2Q96AC6 838 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 GUCD1Q96NT3 240 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 SPC25Q9HBM1 224 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 STARD7Q9NQZ5 370 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 FBXO40Q9UH90 709 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 FEM1BQ9UK73 627 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 ZHX1Q9UKY1 873 aaPredicted RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 RIPK3Q9Y572 518 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
LINC00649-209ENST00000597626 PARP14Q460N5 1801 aa11.37□□□□□ -0.59
LINC00649-209ENST00000597626 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 IGKV6D-41A0A0C4DH26 115 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 MOXD2PA6NHM9 499 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 DCDC2CA8MYV0 355 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 KIAA0355O15063 1070 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 ERC2O15083 957 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 PQBP1O60828 265 aaKnown RBP11.36□□□□□ -0.59
LINC00649-209ENST00000597626 ADAMTS4O75173 837 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 PRDM1O75626 825 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 SNAI1O95863 264 aaPredicted RBP11.36□□□□□ -0.59
LINC00649-209ENST00000597626 TSPY3P0CV98 308 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 TSPY8P0CW00 308 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 ACLYP53396 1101 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 OAZ1P54368 228 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 PDE4BQ07343 736 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 CHST13Q8NET6 341 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 TOX2Q96NM4 488 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 SEMA6BQ9H3T3 888 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 SLC38A10Q9HBR0 1119 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 RAVER2Q9HCJ3 691 aaKnown RBP11.36□□□□□ -0.59
LINC00649-209ENST00000597626 MTMR4Q9NYA4 1195 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 SMCHD1A6NHR9 2005 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 LAMA3Q16787 3333 aa11.36□□□□□ -0.59
LINC00649-209ENST00000597626 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 M0R2C6 588 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 DUSP11O75319 330 aaKnown RBP11.35□□□□□ -0.59
LINC00649-209ENST00000597626 BMP3P12645 472 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 KCNA10Q16322 511 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 TSHZ3Q63HK5 1081 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 SLFN13Q68D06 897 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00649-209ENST00000597626 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00649-209ENST00000597626 PCSK9Q8NBP7 692 aaKnown RBP11.35□□□□□ -0.59
LINC00649-209ENST00000597626 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 KLHDC9Q8NEP7 349 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 GLT1D1Q96MS3 346 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 CDX2Q99626 313 aaPredicted RBP11.35□□□□□ -0.59
LINC00649-209ENST00000597626 NAPBQ9H115 298 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 ABHD16BQ9H3Z7 469 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 EPB41L4AQ9HCS5 686 aaPredicted RBP11.35□□□□□ -0.59
LINC00649-209ENST00000597626 LTBP2Q14767 1821 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
LINC00649-209ENST00000597626 C6orf222P0C671 652 aaPredicted RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 ITGB8P26012 769 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 CST5P28325 142 aaPredicted RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 TFAP4Q01664 338 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 FPGSQ05932 587 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 LRRC47Q8N1G4 583 aaKnown RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 LENG1Q96BZ8 264 aaPredicted RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 RNPC3Q96LT9 517 aaKnown RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
LINC00649-209ENST00000597626 PLXNA1Q9UIW2 1896 aa11.34□□□□□ -0.59
LINC00649-209ENST00000597626 ELP1O95163 1332 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms