RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 RNF180Q86T96 592 aa16.66■□□□□ 0.26
C19orf54-206ENST00000596940 CPXCR1Q8N123 301 aa16.66■□□□□ 0.26
C19orf54-206ENST00000596940 CHST13Q8NET6 341 aa16.66■□□□□ 0.26
C19orf54-206ENST00000596940 CHURC1Q8WUH1 139 aa16.66■□□□□ 0.26
C19orf54-206ENST00000596940 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
C19orf54-206ENST00000596940 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
C19orf54-206ENST00000596940 PLIN4Q96Q06 1357 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 AKR1A1P14550 325 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 PDE1AP54750 535 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 LRRC47Q8N1G4 583 aaKnown RBP16.65■□□□□ 0.26
C19orf54-206ENST00000596940 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
C19orf54-206ENST00000596940 XPNPEP3Q9NQH7 507 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
C19orf54-206ENST00000596940 ZNF236Q9UL36 1845 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 SALL3Q9BXA9 1300 aa16.65■□□□□ 0.26
C19orf54-206ENST00000596940 SLC1A4P43007 532 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 STAT2P52630 851 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 RTP1P59025 263 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
C19orf54-206ENST00000596940 LRRC41Q15345 812 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 FAM47AQ5JRC9 791 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 C1orf53Q5VUE5 145 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 SLC39A5Q6ZMH5 540 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
C19orf54-206ENST00000596940 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 ANAPC4Q9UJX5 808 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 STX8Q9UNK0 236 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 ATP11BQ9Y2G3 1177 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 MYH7P12883 1935 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 A0A0G2JMZ2 1700 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 SYNGAP1Q96PV0 1343 aa16.64■□□□□ 0.25
C19orf54-206ENST00000596940 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
C19orf54-206ENST00000596940 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
C19orf54-206ENST00000596940 ALX1Q15699 326 aa16.63■□□□□ 0.25
C19orf54-206ENST00000596940 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
C19orf54-206ENST00000596940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
C19orf54-206ENST00000596940 STAG1Q8WVM7 1258 aa16.63■□□□□ 0.25
C19orf54-206ENST00000596940 RAVER2Q9HCJ3 691 aaKnown RBP16.63■□□□□ 0.25
C19orf54-206ENST00000596940 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
C19orf54-206ENST00000596940 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 PLA2G6O60733 806 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
C19orf54-206ENST00000596940 TKFCQ3LXA3 575 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 PHF24Q9UPV7 400 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
C19orf54-206ENST00000596940 RIPK3Q9Y572 518 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 MYH8P13535 1937 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 RLFQ13129 1914 aa16.62■□□□□ 0.25
C19orf54-206ENST00000596940 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
C19orf54-206ENST00000596940 ORC4O43929 436 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
C19orf54-206ENST00000596940 ZNF865P0CJ78 1059 aaPredicted RBP16.61■□□□□ 0.25
C19orf54-206ENST00000596940 MCCP23508 829 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
C19orf54-206ENST00000596940 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 SNX17Q15036 470 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 LRCH3Q96II8 777 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 TSEN34Q9BSV6 310 aaKnown RBP16.61■□□□□ 0.25
C19orf54-206ENST00000596940 ACAD9Q9H845 621 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 SPC25Q9HBM1 224 aa16.61■□□□□ 0.25
C19orf54-206ENST00000596940 TRIM6-TRIM34B2RNG4 842 aa16.6■□□□□ 0.25
C19orf54-206ENST00000596940 PCP11498 1178 aaKnown RBP16.6■□□□□ 0.25
C19orf54-206ENST00000596940 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
C19orf54-206ENST00000596940 FERMT2Q96AC1 680 aa16.6■□□□□ 0.25
C19orf54-206ENST00000596940 ABHD16BQ9H3Z7 469 aa16.6■□□□□ 0.25
C19orf54-206ENST00000596940 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
C19orf54-206ENST00000596940 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
C19orf54-206ENST00000596940 LAMA3Q16787 3333 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 SZT2Q5T011 3432 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 PGK1P00558 417 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 FGRP09769 529 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 TAL1P17542 331 aaPredicted RBP16.59■□□□□ 0.25
C19orf54-206ENST00000596940 ACVR2BQ13705 512 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 TRIM60Q495X7 471 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
C19orf54-206ENST00000596940 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
C19orf54-206ENST00000596940 MOXD2PA6NHM9 499 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 POTEB2H3BUK9 544 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 FOXP2O15409 715 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 DUSP11O75319 330 aaKnown RBP16.58■□□□□ 0.24
C19orf54-206ENST00000596940 SNAI1O95863 264 aaPredicted RBP16.58■□□□□ 0.24
C19orf54-206ENST00000596940 FGAP02671 866 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 NT5C2P49902 561 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 VPS53Q5VIR6 699 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 DEFB123Q8N688 67 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 PCSK9Q8NBP7 692 aaKnown RBP16.58■□□□□ 0.24
C19orf54-206ENST00000596940 DCAF4Q8WV16 495 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
C19orf54-206ENST00000596940 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms