RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 NCOA5Q9HCD5 579 aaKnown RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 BTBD7Q9P203 1132 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 RBPJLQ9UBG7 517 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PPP1R9AQ9ULJ8 1098 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PRR12Q9ULL5 1215 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 BAZ2BQ9UIF8 2168 aaKnown RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 GOLGA8AA7E2F4 631 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 PPFIA3O75145 1194 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 DDAH1O94760 285 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 ADD1P35611 737 aaKnown RBP18.09■□□□□ 0.49
SMCO4-206ENST00000596676 MAP2K1Q02750 393 aaPredicted RBP18.09■□□□□ 0.49
SMCO4-206ENST00000596676 Q3C1V9 767 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 SYDE2Q5VT97 1194 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 CCDC82Q8N4S0 544 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 SRBD1Q8N5C6 995 aaKnown RBP18.09■□□□□ 0.49
SMCO4-206ENST00000596676 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 PIBF1Q8WXW3 757 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 SLF1Q9BQI6 1058 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 PAGR1Q9BTK6 254 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 ZFYVE28Q9HCC9 887 aa18.09■□□□□ 0.49
SMCO4-206ENST00000596676 COL11A1P12107 1806 aaPredicted RBP18.08■□□□□ 0.48
SMCO4-206ENST00000596676 CYTH3O43739 400 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 STAT2P52630 851 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 EVCP57679 992 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 ASPRV1Q53RT3 343 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 BTNL9Q6UXG8 535 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 SYNE3Q6ZMZ3 975 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 ANKRD13CQ8N6S4 541 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 NECAB1Q8N987 351 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 SMCR8Q8TEV9 937 aaPredicted RBP18.08■□□□□ 0.48
SMCO4-206ENST00000596676 PARK7Q99497 189 aaKnown RBP18.08■□□□□ 0.48
SMCO4-206ENST00000596676 ZCCHC17Q9NP64 241 aaKnown RBP18.08■□□□□ 0.48
SMCO4-206ENST00000596676 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
SMCO4-206ENST00000596676 hCG_1642624A0A1W2PR95 340 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 VWA5AO00534 786 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 TLR2O60603 784 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 ALDH1A1P00352 501 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 CAP1Q01518 475 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 ME3Q16798 604 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 RTN1Q16799 776 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 GPATCH4Q5T3I0 446 aaKnown RBP18.07■□□□□ 0.48
SMCO4-206ENST00000596676 CCDC174Q6PII3 467 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 C17orf99Q6UX52 265 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 FAM160B2Q86V87 743 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 ADGRF4Q8IZF3 695 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 PRPF38AQ8NAV1 312 aaKnown RBP18.07■□□□□ 0.48
SMCO4-206ENST00000596676 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
SMCO4-206ENST00000596676 CHURC1Q8WUH1 139 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 HOXC10Q9NYD6 342 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 ADAMTS5Q9UNA0 930 aa18.07■□□□□ 0.48
SMCO4-206ENST00000596676 SMCHD1A6NHR9 2005 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 FOXN1O15353 648 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 METAP2P50579 478 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMCO4-206ENST00000596676 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 LBX2Q6XYB7 198 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
SMCO4-206ENST00000596676 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
SMCO4-206ENST00000596676 RAVER2Q9HCJ3 691 aaKnown RBP18.06■□□□□ 0.48
SMCO4-206ENST00000596676 DHX16O60231 1041 aaKnown RBP18.05■□□□□ 0.48
SMCO4-206ENST00000596676 PLA2G6O60733 806 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 HSPA1AP0DMV8 641 aaKnown RBP18.05■□□□□ 0.48
SMCO4-206ENST00000596676 HSPA1BP0DMV9 641 aaKnown RBP18.05■□□□□ 0.48
SMCO4-206ENST00000596676 CALM1P0DP23 149 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 CALM2P0DP24 149 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 CALM3P0DP25 149 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 BCRP11274 1271 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 ST3GAL1Q11201 340 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 TMTC3Q6ZXV5 915 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 CPXCR1Q8N123 301 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 SLC38A10Q9HBR0 1119 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 ZSWIM8A7E2V4 1837 aa18.05■□□□□ 0.48
SMCO4-206ENST00000596676 ZNF536O15090 1300 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 CTGFP29279 349 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 KIF5BP33176 963 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 FUT2Q10981 343 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 SCRN1Q12765 414 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 PLS1Q14651 629 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 ANKRD1Q15327 319 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 PIGSQ96S52 555 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 BEGAINQ9BUH8 593 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 CFHR5Q9BXR6 569 aa18.04■□□□□ 0.48
SMCO4-206ENST00000596676 A0A0G2JMZ2 1700 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 PPP1R11O60927 126 aaPredicted RBP18.03■□□□□ 0.48
SMCO4-206ENST00000596676 ZBED4O75132 1171 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 GCLCP48506 637 aaPredicted RBP18.03■□□□□ 0.48
SMCO4-206ENST00000596676 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 ARHGAP39Q9C0H5 1083 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 PORCNQ9H237 461 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
SMCO4-206ENST00000596676 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 SAGE1Q9NXZ1 904 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 MORF4L1Q9UBU8 362 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 ZNF214Q9UL59 606 aaPredicted RBP18.03■□□□□ 0.48
SMCO4-206ENST00000596676 LIMCH1Q9UPQ0 1083 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms