RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 LRRC47Q8N1G4 583 aaKnown RBP30.09■■■□□ 2.41
ZNF558-203ENST00000595786 GMCL1Q96IK5 515 aa30.09■■■□□ 2.41
ZNF558-203ENST00000595786 MAML3Q96JK9 1138 aa30.09■■■□□ 2.41
ZNF558-203ENST00000595786 NRBP1Q9UHY1 535 aa30.09■■■□□ 2.41
ZNF558-203ENST00000595786 CCDC171Q6TFL3 1326 aa30.08■■■□□ 2.41
ZNF558-203ENST00000595786 COL6A1P12109 1028 aa30.08■■■□□ 2.41
ZNF558-203ENST00000595786 CNGA1P29973 690 aa30.08■■■□□ 2.41
ZNF558-203ENST00000595786 NOVP48745 357 aa30.08■■■□□ 2.41
ZNF558-203ENST00000595786 OAZ1P54368 228 aa30.08■■■□□ 2.41
ZNF558-203ENST00000595786 SLC38A10Q9HBR0 1119 aa30.08■■■□□ 2.41
ZNF558-203ENST00000595786 CTDP1Q9Y5B0 961 aaPredicted RBP30.08■■■□□ 2.41
ZNF558-203ENST00000595786 HIP1O00291 1037 aa30.07■■■□□ 2.4
ZNF558-203ENST00000595786 PCP11498 1178 aaKnown RBP30.07■■■□□ 2.4
ZNF558-203ENST00000595786 TRPV1Q8NER1 839 aa30.07■■■□□ 2.4
ZNF558-203ENST00000595786 CHURC1Q8WUH1 139 aa30.07■■■□□ 2.4
ZNF558-203ENST00000595786 IL17RBQ9NRM6 502 aa30.07■■■□□ 2.4
ZNF558-203ENST00000595786 RANBP6O60518 1105 aaKnown RBP30.06■■■□□ 2.4
ZNF558-203ENST00000595786 PLA2G6O60733 806 aa30.06■■■□□ 2.4
ZNF558-203ENST00000595786 ZNF792Q3KQV3 632 aa30.06■■■□□ 2.4
ZNF558-203ENST00000595786 SNRNP48Q6IEG0 339 aaKnown RBP30.06■■■□□ 2.4
ZNF558-203ENST00000595786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.06■■■□□ 2.4
ZNF558-203ENST00000595786 ZNF589Q86UQ0 364 aaPredicted RBP30.06■■■□□ 2.4
ZNF558-203ENST00000595786 FAM160B2Q86V87 743 aa30.06■■■□□ 2.4
ZNF558-203ENST00000595786 KIFC2Q96AC6 838 aa30.06■■■□□ 2.4
ZNF558-203ENST00000595786 INCENPQ9NQS7 918 aa30.06■■■□□ 2.4
ZNF558-203ENST00000595786 STX8Q9UNK0 236 aa30.06■■■□□ 2.4
ZNF558-203ENST00000595786 SEPT4O43236 478 aa30.05■■■□□ 2.4
ZNF558-203ENST00000595786 TACC3Q9Y6A5 838 aa30.05■■■□□ 2.4
ZNF558-203ENST00000595786 SLC1A4P43007 532 aa30.04■■■□□ 2.4
ZNF558-203ENST00000595786 STAG1Q8WVM7 1258 aa30.04■■■□□ 2.4
ZNF558-203ENST00000595786 TCP11L1Q9NUJ3 509 aa30.04■■■□□ 2.4
ZNF558-203ENST00000595786 FBXO40Q9UH90 709 aa30.04■■■□□ 2.4
ZNF558-203ENST00000595786 PFASO15067 1338 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 ALPK3Q96L96 1907 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 TMEM232C9JQI7 657 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 NT5C2P49902 561 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 STAT2P52630 851 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 RCSD1Q6JBY9 416 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 CHRDL2Q6WN34 429 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 MSL3Q8N5Y2 521 aaKnown RBP30.03■■■□□ 2.4
ZNF558-203ENST00000595786 ARRDC4Q8NCT1 418 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 TINF2Q9BSI4 451 aa30.03■■■□□ 2.4
ZNF558-203ENST00000595786 FRMPD3Q5JV73 1810 aa30.02■■■□□ 2.4
ZNF558-203ENST00000595786 PGK2P07205 417 aa30.02■■■□□ 2.4
ZNF558-203ENST00000595786 CPXCR1Q8N123 301 aa30.02■■■□□ 2.4
ZNF558-203ENST00000595786 CHST13Q8NET6 341 aa30.02■■■□□ 2.4
ZNF558-203ENST00000595786 PRO3102Q9H379 93 aa30.02■■■□□ 2.4
ZNF558-203ENST00000595786 RIPK3Q9Y572 518 aa30.02■■■□□ 2.4
ZNF558-203ENST00000595786 DNM1LO00429 736 aa30.01■■■□□ 2.39
ZNF558-203ENST00000595786 MCCP23508 829 aa30.01■■■□□ 2.39
ZNF558-203ENST00000595786 DDX11Q96FC9 970 aa30.01■■■□□ 2.39
ZNF558-203ENST00000595786 DIAPH3Q9NSV4 1193 aa30.01■■■□□ 2.39
ZNF558-203ENST00000595786 TRIOBPQ9H2D6 2365 aa30■■■□□ 2.39
ZNF558-203ENST00000595786 NMT2O60551 498 aa30■■■□□ 2.39
ZNF558-203ENST00000595786 AKNAD1Q5T1N1 836 aa30■■■□□ 2.39
ZNF558-203ENST00000595786 RNF41Q9H4P4 317 aaPredicted RBP30■■■□□ 2.39
ZNF558-203ENST00000595786 RAVER2Q9HCJ3 691 aaKnown RBP30■■■□□ 2.39
ZNF558-203ENST00000595786 TOMM22Q9NS69 142 aa30■■■□□ 2.39
ZNF558-203ENST00000595786 PLXNA1Q9UIW2 1896 aa29.99■■■□□ 2.39
ZNF558-203ENST00000595786 DNAJC25-GNG10A0A024R161 153 aa29.99■■■□□ 2.39
ZNF558-203ENST00000595786 MFSD6Q6ZSS7 791 aa29.99■■■□□ 2.39
ZNF558-203ENST00000595786 PRAMEF19Q5SWL8 479 aa29.98■■■□□ 2.39
ZNF558-203ENST00000595786 CWC27Q6UX04 472 aaKnown RBP29.98■■■□□ 2.39
ZNF558-203ENST00000595786 ZNF467Q7Z7K2 595 aaPredicted RBP29.98■■■□□ 2.39
ZNF558-203ENST00000595786 C7orf61Q8IZ16 206 aa29.98■■■□□ 2.39
ZNF558-203ENST00000595786 DCAF4Q8WV16 495 aa29.98■■■□□ 2.39
ZNF558-203ENST00000595786 TTC14Q96N46 770 aa29.98■■■□□ 2.39
ZNF558-203ENST00000595786 RBM27Q9P2N5 1060 aaKnown RBP29.98■■■□□ 2.39
ZNF558-203ENST00000595786 A0A1W2PPC1 479 aa29.97■■■□□ 2.39
ZNF558-203ENST00000595786 TOP1P11387 765 aaKnown RBP29.97■■■□□ 2.39
ZNF558-203ENST00000595786 IKQ13123 557 aaPredicted RBP29.97■■■□□ 2.39
ZNF558-203ENST00000595786 RRP12Q5JTH9 1297 aaKnown RBP29.97■■■□□ 2.39
ZNF558-203ENST00000595786 MAMDC4Q6UXC1 1216 aa29.97■■■□□ 2.39
ZNF558-203ENST00000595786 ISY1Q9ULR0 285 aaKnown RBP29.97■■■□□ 2.39
ZNF558-203ENST00000595786 ZNF213O14771 459 aa29.96■■■□□ 2.39
ZNF558-203ENST00000595786 FXR1P51114 621 aaKnown RBP eCLIP29.96■■■□□ 2.39
ZNF558-203ENST00000595786 TKFCQ3LXA3 575 aa29.96■■■□□ 2.39
ZNF558-203ENST00000595786 SYNGAP1Q96PV0 1343 aa29.96■■■□□ 2.39
ZNF558-203ENST00000595786 HAND2P61296 217 aa29.95■■■□□ 2.39
ZNF558-203ENST00000595786 ANKRD35Q8N283 1001 aa29.95■■■□□ 2.39
ZNF558-203ENST00000595786 DSCC1Q9BVC3 393 aa29.95■■■□□ 2.39
ZNF558-203ENST00000595786 SENP6Q9GZR1 1112 aaPredicted RBP29.95■■■□□ 2.39
ZNF558-203ENST00000595786 CNPY2Q9Y2B0 182 aa29.95■■■□□ 2.39
ZNF558-203ENST00000595786 SMCHD1A6NHR9 2005 aa29.95■■■□□ 2.38
ZNF558-203ENST00000595786 SLC4A3P48751 1232 aa29.94■■■□□ 2.38
ZNF558-203ENST00000595786 LRRC26Q2I0M4 334 aa29.94■■■□□ 2.38
ZNF558-203ENST00000595786 KCTD1Q719H9 257 aa29.94■■■□□ 2.38
ZNF558-203ENST00000595786 ESR2Q92731 530 aa29.94■■■□□ 2.38
ZNF558-203ENST00000595786 TMEM47Q9BQJ4 181 aa29.94■■■□□ 2.38
ZNF558-203ENST00000595786 KBTBD13C9JR72 458 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 BMP8BP34820 402 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 BTNL9Q6UXG8 535 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 ACAD9Q9H845 621 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 CTNNA3Q9UI47 895 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 PRR12Q9ULL5 1215 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 ZNF536O15090 1300 aa29.93■■■□□ 2.38
ZNF558-203ENST00000595786 ZNF865P0CJ78 1059 aaPredicted RBP29.92■■■□□ 2.38
ZNF558-203ENST00000595786 RARBP10826 455 aa29.92■■■□□ 2.38
ZNF558-203ENST00000595786 PDE4AP27815 886 aa29.92■■■□□ 2.38
ZNF558-203ENST00000595786 CCDC178Q5BJE1 867 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms