RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 C7orf61Q8IZ16 206 aa27.83■■■□□ 2.05
LSM4-204ENST00000594828 STX8Q9UNK0 236 aa27.83■■■□□ 2.05
LSM4-204ENST00000594828 PFASO15067 1338 aa27.83■■■□□ 2.05
LSM4-204ENST00000594828 RANBP6O60518 1105 aaKnown RBP27.82■■■□□ 2.04
LSM4-204ENST00000594828 HSPD1P10809 573 aaKnown RBP27.82■■■□□ 2.04
LSM4-204ENST00000594828 CPXCR1Q8N123 301 aa27.82■■■□□ 2.04
LSM4-204ENST00000594828 IL17RBQ9NRM6 502 aa27.82■■■□□ 2.04
LSM4-204ENST00000594828 RBM27Q9P2N5 1060 aaKnown RBP27.82■■■□□ 2.04
LSM4-204ENST00000594828 TACC3Q9Y6A5 838 aa27.82■■■□□ 2.04
LSM4-204ENST00000594828 ATP2A1O14983 1001 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 FGRP09769 529 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 SDSP20132 328 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 SLC4A3P48751 1232 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 PRAMEF19Q5SWL8 479 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 ZNF589Q86UQ0 364 aaPredicted RBP27.81■■■□□ 2.04
LSM4-204ENST00000594828 SLC38A10Q9HBR0 1119 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 ISY1Q9ULR0 285 aaKnown RBP27.81■■■□□ 2.04
LSM4-204ENST00000594828 DIS3Q9Y2L1 958 aaKnown RBP27.81■■■□□ 2.04
LSM4-204ENST00000594828 RIPK3Q9Y572 518 aa27.81■■■□□ 2.04
LSM4-204ENST00000594828 ZNFX1Q9P2E3 1918 aaKnown RBP27.8■■■□□ 2.04
LSM4-204ENST00000594828 TMEM232C9JQI7 657 aa27.8■■■□□ 2.04
LSM4-204ENST00000594828 SEPT4O43236 478 aa27.8■■■□□ 2.04
LSM4-204ENST00000594828 ORC4O43929 436 aa27.8■■■□□ 2.04
LSM4-204ENST00000594828 ZNF792Q3KQV3 632 aa27.8■■■□□ 2.04
LSM4-204ENST00000594828 TOMM22Q9NS69 142 aa27.8■■■□□ 2.04
LSM4-204ENST00000594828 CCDC171Q6TFL3 1326 aa27.8■■■□□ 2.04
LSM4-204ENST00000594828 ALPK3Q96L96 1907 aa27.79■■■□□ 2.04
LSM4-204ENST00000594828 NMT2O60551 498 aa27.79■■■□□ 2.04
LSM4-204ENST00000594828 SLC1A4P43007 532 aa27.79■■■□□ 2.04
LSM4-204ENST00000594828 FXR1P51114 621 aaKnown RBP eCLIP27.79■■■□□ 2.04
LSM4-204ENST00000594828 GMCL1Q96IK5 515 aa27.79■■■□□ 2.04
LSM4-204ENST00000594828 RAVER2Q9HCJ3 691 aaKnown RBP27.79■■■□□ 2.04
LSM4-204ENST00000594828 MCCP23508 829 aa27.78■■■□□ 2.04
LSM4-204ENST00000594828 MFAP1P55081 439 aaKnown RBP27.78■■■□□ 2.04
LSM4-204ENST00000594828 CHURC1Q8WUH1 139 aa27.78■■■□□ 2.04
LSM4-204ENST00000594828 CHMP4CQ96CF2 233 aa27.78■■■□□ 2.04
LSM4-204ENST00000594828 DDX11Q96FC9 970 aa27.78■■■□□ 2.04
LSM4-204ENST00000594828 TINF2Q9BSI4 451 aa27.78■■■□□ 2.04
LSM4-204ENST00000594828 PRO3102Q9H379 93 aa27.78■■■□□ 2.04
LSM4-204ENST00000594828 ZMYM6O95789 1325 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 FDX1P10109 184 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 STAT2P52630 851 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 OAZ1P54368 228 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 RRP12Q5JTH9 1297 aaKnown RBP27.77■■■□□ 2.04
LSM4-204ENST00000594828 ANO1Q5XXA6 986 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 FAM160B2Q86V87 743 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 ARRDC4Q8NCT1 418 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 SENP6Q9GZR1 1112 aaPredicted RBP27.77■■■□□ 2.04
LSM4-204ENST00000594828 NRBP1Q9UHY1 535 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 ZMYND8Q9ULU4 1186 aaPredicted RBP27.77■■■□□ 2.04
LSM4-204ENST00000594828 CEP290O15078 2479 aa27.77■■■□□ 2.04
LSM4-204ENST00000594828 DNM1LO00429 736 aa27.76■■■□□ 2.03
LSM4-204ENST00000594828 IKQ13123 557 aaPredicted RBP27.76■■■□□ 2.03
LSM4-204ENST00000594828 STAG1Q8WVM7 1258 aa27.76■■■□□ 2.03
LSM4-204ENST00000594828 FRMPD3Q5JV73 1810 aa27.76■■■□□ 2.03
LSM4-204ENST00000594828 HAND2P61296 217 aa27.75■■■□□ 2.03
LSM4-204ENST00000594828 LRRC26Q2I0M4 334 aa27.75■■■□□ 2.03
LSM4-204ENST00000594828 RCSD1Q6JBY9 416 aa27.75■■■□□ 2.03
LSM4-204ENST00000594828 FBXO40Q9UH90 709 aa27.75■■■□□ 2.03
LSM4-204ENST00000594828 NOVP48745 357 aa27.74■■■□□ 2.03
LSM4-204ENST00000594828 GJC2Q5T442 439 aaPredicted RBP27.74■■■□□ 2.03
LSM4-204ENST00000594828 CWC27Q6UX04 472 aaKnown RBP27.74■■■□□ 2.03
LSM4-204ENST00000594828 KCTD1Q719H9 257 aa27.74■■■□□ 2.03
LSM4-204ENST00000594828 CHST13Q8NET6 341 aa27.74■■■□□ 2.03
LSM4-204ENST00000594828 DIAPH3Q9NSV4 1193 aa27.74■■■□□ 2.03
LSM4-204ENST00000594828 HIP1O00291 1037 aa27.73■■■□□ 2.03
LSM4-204ENST00000594828 PLA2G6O60733 806 aa27.73■■■□□ 2.03
LSM4-204ENST00000594828 SYN1P17600 705 aa27.73■■■□□ 2.03
LSM4-204ENST00000594828 MFSD6Q6ZSS7 791 aa27.73■■■□□ 2.03
LSM4-204ENST00000594828 ANKRD35Q8N283 1001 aa27.73■■■□□ 2.03
LSM4-204ENST00000594828 MTMR7Q9Y216 660 aa27.73■■■□□ 2.03
LSM4-204ENST00000594828 DNAJC25-GNG10A0A024R161 153 aa27.72■■■□□ 2.03
LSM4-204ENST00000594828 MYCNP04198 464 aaPredicted RBP27.72■■■□□ 2.03
LSM4-204ENST00000594828 AKNAD1Q5T1N1 836 aa27.72■■■□□ 2.03
LSM4-204ENST00000594828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.72■■■□□ 2.034e-8■■■□□ 18.3
LSM4-204ENST00000594828 MSL3Q8N5Y2 521 aaKnown RBP27.72■■■□□ 2.03
LSM4-204ENST00000594828 TCP11L1Q9NUJ3 509 aa27.72■■■□□ 2.03
LSM4-204ENST00000594828 CNPY2Q9Y2B0 182 aa27.72■■■□□ 2.03
LSM4-204ENST00000594828 KBTBD13C9JR72 458 aa27.71■■■□□ 2.03
LSM4-204ENST00000594828 PCP11498 1178 aaKnown RBP27.71■■■□□ 2.03
LSM4-204ENST00000594828 TAL1P17542 331 aaPredicted RBP27.71■■■□□ 2.03
LSM4-204ENST00000594828 PLXNA1Q9UIW2 1896 aa27.71■■■□□ 2.03
LSM4-204ENST00000594828 TOP1P11387 765 aaKnown RBP27.7■■■□□ 2.02
LSM4-204ENST00000594828 ATN1P54259 1190 aaPredicted RBP27.7■■■□□ 2.02
LSM4-204ENST00000594828 IRX6P78412 446 aaPredicted RBP27.7■■■□□ 2.02
LSM4-204ENST00000594828 DCAF4Q8WV16 495 aa27.7■■■□□ 2.02
LSM4-204ENST00000594828 GDF15Q99988 308 aa27.7■■■□□ 2.02
LSM4-204ENST00000594828 TMEM47Q9BQJ4 181 aa27.7■■■□□ 2.02
LSM4-204ENST00000594828 RNF41Q9H4P4 317 aaPredicted RBP27.7■■■□□ 2.02
LSM4-204ENST00000594828 HOMER2Q9NSB8 354 aa27.7■■■□□ 2.02
LSM4-204ENST00000594828 A0A1W2PPC1 479 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 ZNF213O14771 459 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 ZNF865P0CJ78 1059 aaPredicted RBP27.69■■■□□ 2.02
LSM4-204ENST00000594828 RARBP10826 455 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 CCDC96Q2M329 555 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 MAMDC4Q6UXC1 1216 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 ZNF467Q7Z7K2 595 aaPredicted RBP27.69■■■□□ 2.02
LSM4-204ENST00000594828 AGBL1Q96MI9 1066 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 PRR12Q9ULL5 1215 aa27.69■■■□□ 2.02
LSM4-204ENST00000594828 ZNF536O15090 1300 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms