RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SPAG1Q07617 926 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 ANKRD20A12PQ8NF67 263 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 SLF1Q9BQI6 1058 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 PYM1Q9BRP8 204 aaKnown RBP18.58■□□□□ 0.57
LIG1-206ENST00000594067 SPATA31A1Q5TZJ5 1347 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 HIBADHP31937 336 aaKnown RBP18.58■□□□□ 0.56
LIG1-206ENST00000594067 KRT9P35527 623 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 LONP1P36776 959 aaKnown RBP18.58■□□□□ 0.56
LIG1-206ENST00000594067 STAG2Q8N3U4 1231 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 CCDC24Q8N4L8 307 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
LIG1-206ENST00000594067 KAT14Q9H8E8 782 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 PDE11AQ9HCR9 933 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 RMND1Q9NWS8 449 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
LIG1-206ENST00000594067 ARPP21Q9UBL0 812 aaPredicted RBP18.58■□□□□ 0.56
LIG1-206ENST00000594067 PP2D1A8MPX8 630 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 VGLL3A8MV65 326 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 KIF5BP33176 963 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 LMAN1P49257 510 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 UBXN1Q04323 297 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 MCM6Q14566 821 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 CYP26C1Q6V0L0 522 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 PLIN2Q99541 437 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 L1RE1Q9UN81 338 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 MTMR7Q9Y216 660 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 TFAP4Q01664 338 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 ARL6IP4Q66PJ3 421 aaKnown RBP18.57■□□□□ 0.56
LIG1-206ENST00000594067 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 DLEC1Q9Y238 1755 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 CALML3P27482 149 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 ARHGAP25P42331 645 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 RPS8P62241 208 aaKnown RBP18.57■□□□□ 0.56
LIG1-206ENST00000594067 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 TYW1BQ6NUM6 668 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 GOLGA5Q8TBA6 731 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 CHP1Q99653 195 aa18.57■□□□□ 0.56
LIG1-206ENST00000594067 A0A1B0GUL6 1792 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 MYH13Q9UKX3 1938 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 POTEB2H3BUK9 544 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 WWC2Q6AWC2 1192 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 HDXQ7Z353 690 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 ZBTB9Q96C00 473 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 DYNLL2Q96FJ2 89 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 DISC1Q9NRI5 854 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 PCDHA4Q9UN74 947 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
LIG1-206ENST00000594067 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
LIG1-206ENST00000594067 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
LIG1-206ENST00000594067 TUBB2AQ13885 445 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 SBK1Q52WX2 424 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 IRF2BP1Q8IU81 584 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 MSL3Q8N5Y2 521 aaKnown RBP18.56■□□□□ 0.56
LIG1-206ENST00000594067 PNMA1Q8ND90 353 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 NAPGQ99747 312 aaPredicted RBP18.56■□□□□ 0.56
LIG1-206ENST00000594067 TUBB2BQ9BVA1 445 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 TMEM60Q9H2L4 133 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 SUGCTQ9HAC7 445 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 IL17RBQ9NRM6 502 aa18.56■□□□□ 0.56
LIG1-206ENST00000594067 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 PMS1P54277 932 aaKnown RBP18.55■□□□□ 0.56
LIG1-206ENST00000594067 TRIM14Q14142 442 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 NAALADL2Q58DX5 795 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 RREB1Q92766 1687 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 CCDC194A0A1B0GVG4 234 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 ACTN2P35609 894 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 DTHD1Q6ZMT9 781 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 ADSSL1Q8N142 457 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 LCMT1Q9UIC8 334 aa18.55■□□□□ 0.56
LIG1-206ENST00000594067 H7C1D1 291 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 RHOXF2BP0C7M4 288 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 RHOXF2Q9BQY4 288 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 VPS18Q9P253 973 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 TRIM10Q9UDY6 481 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 N4BP1O75113 896 aaKnown RBP18.54■□□□□ 0.56
LIG1-206ENST00000594067 TUBB4BP68371 445 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 INF2Q27J81 1249 aa18.54■□□□□ 0.56
LIG1-206ENST00000594067 DZIP1Q86YF9 867 aaKnown RBP18.54■□□□□ 0.56
LIG1-206ENST00000594067 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 ERLIN1O75477 346 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 USP17L1Q7RTZ2 530 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 CWC15Q9P013 229 aaKnown RBP18.53■□□□□ 0.56
LIG1-206ENST00000594067 PCDHA6Q9UN73 950 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 PCDHA8Q9Y5H6 950 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 EPN1Q9Y6I3 576 aaPredicted RBP18.53■□□□□ 0.56
LIG1-206ENST00000594067 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 SLC35G1Q2M3R5 365 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 MB21D1Q8N884 522 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
LIG1-206ENST00000594067 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 GUCA1BQ9UMX6 200 aa18.53■□□□□ 0.56
LIG1-206ENST00000594067 REXO2Q9Y3B8 237 aaKnown RBP18.53■□□□□ 0.56
LIG1-206ENST00000594067 MYH8P13535 1937 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 MYO1CO00159 1063 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms