RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 C9orf50Q5SZB4 431 aa25.78■■□□□ 1.72
USF2-204ENST00000593708 C1orf53Q5VUE5 145 aa25.78■■□□□ 1.72
USF2-204ENST00000593708 SNRNP48Q6IEG0 339 aaKnown RBP25.78■■□□□ 1.72
USF2-204ENST00000593708 OTUD7AQ8TE49 926 aaPredicted RBP25.78■■□□□ 1.72
USF2-204ENST00000593708 TRIM43Q96BQ3 446 aaPredicted RBP25.78■■□□□ 1.72
USF2-204ENST00000593708 GUCD1Q96NT3 240 aa25.78■■□□□ 1.72
USF2-204ENST00000593708 COPB2P35606 906 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 TDO2P48775 406 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 TLE2Q04725 743 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 SHHQ15465 462 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 BADQ92934 168 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 CEP95Q96GE4 821 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 SEC62Q99442 399 aaKnown RBP25.77■■□□□ 1.72
USF2-204ENST00000593708 CLIP2Q9UDT6 1046 aa25.77■■□□□ 1.72
USF2-204ENST00000593708 DNAJC25-GNG10A0A024R161 153 aa25.76■■□□□ 1.71
USF2-204ENST00000593708 ZFYP08048 801 aaPredicted RBP25.76■■□□□ 1.71
USF2-204ENST00000593708 ADAMTS4O75173 837 aa25.75■■□□□ 1.71
USF2-204ENST00000593708 SNAI1O95863 264 aaPredicted RBP25.75■■□□□ 1.71
USF2-204ENST00000593708 ITGB8P26012 769 aa25.75■■□□□ 1.71
USF2-204ENST00000593708 FAM109BQ6ICB4 259 aaPredicted RBP25.75■■□□□ 1.71
USF2-204ENST00000593708 LRRC47Q8N1G4 583 aaKnown RBP25.75■■□□□ 1.71
USF2-204ENST00000593708 PRPF38AQ8NAV1 312 aaKnown RBP25.75■■□□□ 1.71
USF2-204ENST00000593708 PI4K2BQ8TCG2 481 aa25.75■■□□□ 1.71
USF2-204ENST00000593708 MTMR4Q9NYA4 1195 aa25.75■■□□□ 1.71
USF2-204ENST00000593708 PCDHB15Q9Y5E8 787 aa25.75■■□□□ 1.71
USF2-204ENST00000593708 PLIN4Q96Q06 1357 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 A0A1W2PQ45 241 aaPredicted RBP25.74■■□□□ 1.71
USF2-204ENST00000593708 A0A1W2PQY0 241 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 APPP05067 770 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 AKR1A1P14550 325 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 GNAT2P19087 354 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 IFNL3Q8IZI9 196 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 MKL1Q969V6 931 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 FGD4Q96M96 766 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 FAM161BQ96MY7 647 aa25.74■■□□□ 1.71
USF2-204ENST00000593708 ATP2A1O14983 1001 aa25.73■■□□□ 1.71
USF2-204ENST00000593708 RNF180Q86T96 592 aa25.73■■□□□ 1.71
USF2-204ENST00000593708 CPXCR1Q8N123 301 aa25.73■■□□□ 1.71
USF2-204ENST00000593708 KIFC2Q96AC6 838 aa25.73■■□□□ 1.71
USF2-204ENST00000593708 SLC38A10Q9HBR0 1119 aa25.73■■□□□ 1.71
USF2-204ENST00000593708 RAVER2Q9HCJ3 691 aaKnown RBP25.73■■□□□ 1.71
USF2-204ENST00000593708 CNPY2Q9Y2B0 182 aa25.73■■□□□ 1.71
USF2-204ENST00000593708 SYNGAP1Q96PV0 1343 aa25.72■■□□□ 1.71
USF2-204ENST00000593708 SYNRGQ9UMZ2 1314 aa25.72■■□□□ 1.71
USF2-204ENST00000593708 PATL2C9JE40 543 aaKnown RBP25.72■■□□□ 1.71
USF2-204ENST00000593708 SLC4A3P48751 1232 aa25.72■■□□□ 1.71
USF2-204ENST00000593708 MAMDC4Q6UXC1 1216 aa25.72■■□□□ 1.71
USF2-204ENST00000593708 TTC41PQ6P2S7 1318 aa25.71■■□□□ 1.71
USF2-204ENST00000593708 FOXP2O15409 715 aa25.71■■□□□ 1.71
USF2-204ENST00000593708 ADCY6O43306 1168 aa25.71■■□□□ 1.71
USF2-204ENST00000593708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.71■■□□□ 1.713e-6■■■■■ 31.5
USF2-204ENST00000593708 ZNF444Q8N0Y2 327 aaPredicted RBP25.71■■□□□ 1.71
USF2-204ENST00000593708 MSL3Q8N5Y2 521 aaKnown RBP25.71■■□□□ 1.71
USF2-204ENST00000593708 MYADML2A6NDP7 307 aa25.7■■□□□ 1.7
USF2-204ENST00000593708 PQBP1O60828 265 aaKnown RBP25.7■■□□□ 1.7
USF2-204ENST00000593708 TTLL1O95922 423 aa25.7■■□□□ 1.7
USF2-204ENST00000593708 CLTBP09497 229 aa25.7■■□□□ 1.7
USF2-204ENST00000593708 EPHB4P54760 987 aa25.7■■□□□ 1.7
USF2-204ENST00000593708 IRX5P78411 483 aaPredicted RBP25.7■■□□□ 1.7
USF2-204ENST00000593708 GMCL1P1Q8NEA9 526 aa25.7■■□□□ 1.7
USF2-204ENST00000593708 DDX11Q96FC9 970 aa25.7■■□□□ 1.7
USF2-204ENST00000593708 ZHX1Q9UKY1 873 aaPredicted RBP25.7■■□□□ 1.7
USF2-204ENST00000593708 ZBED4O75132 1171 aa25.69■■□□□ 1.7
USF2-204ENST00000593708 ZMYM1Q5SVZ6 1142 aa25.69■■□□□ 1.7
USF2-204ENST00000593708 NEDD1Q8NHV4 660 aa25.69■■□□□ 1.7
USF2-204ENST00000593708 ZNF287Q9HBT7 754 aa25.69■■□□□ 1.7
USF2-204ENST00000593708 FEM1BQ9UK73 627 aa25.69■■□□□ 1.7
USF2-204ENST00000593708 SYNPO2Q9UMS6 1093 aa25.69■■□□□ 1.7
USF2-204ENST00000593708 SPTBN5Q9NRC6 3674 aaKnown RBP25.68■■□□□ 1.7
USF2-204ENST00000593708 KIAA0355O15063 1070 aa25.68■■□□□ 1.7
USF2-204ENST00000593708 ACLYP53396 1101 aa25.68■■□□□ 1.7
USF2-204ENST00000593708 CCSAPQ6IQ19 270 aaPredicted RBP25.68■■□□□ 1.7
USF2-204ENST00000593708 ZNF467Q7Z7K2 595 aaPredicted RBP25.68■■□□□ 1.7
USF2-204ENST00000593708 KLHDC9Q8NEP7 349 aa25.68■■□□□ 1.7
USF2-204ENST00000593708 FSD1Q9BTV5 496 aa25.68■■□□□ 1.7
USF2-204ENST00000593708 TACC3Q9Y6A5 838 aa25.68■■□□□ 1.7
USF2-204ENST00000593708 LRRC37A2A6NM11 1700 aa25.68■■□□□ 1.7
USF2-204ENST00000593708 TSPY3P0CV98 308 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 TSPY8P0CW00 308 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 PPARAQ07869 468 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 ZNF697Q5TEC3 545 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 SLFN13Q68D06 897 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 CHMP4CQ96CF2 233 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 TSEN34Q9BSV6 310 aaKnown RBP25.67■■□□□ 1.7
USF2-204ENST00000593708 NACAP1Q9BZK3 213 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 HOMER2Q9NSB8 354 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.67■■□□□ 1.7
USF2-204ENST00000593708 FAM184BQ9ULE4 1060 aa25.67■■□□□ 1.7
USF2-204ENST00000593708 CHD9Q3L8U1 2897 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 SALL3Q9BXA9 1300 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 BMP3P12645 472 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 TFAP4Q01664 338 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 CCDC129Q6ZRS4 1044 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 RASGRP2Q7LDG7 609 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 ANKRD35Q8N283 1001 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 NAPBQ9H115 298 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 LCTP09848 1927 aa25.66■■□□□ 1.7
USF2-204ENST00000593708 ERC2O15083 957 aa25.65■■□□□ 1.7
USF2-204ENST00000593708 DUSP11O75319 330 aaKnown RBP25.65■■□□□ 1.7
USF2-204ENST00000593708 MX1P20591 662 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 631.6 ms