RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TDO2P48775 406 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 TLE2Q04725 743 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 SBK1Q52WX2 424 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 SH3RF1Q7Z6J0 888 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 REPS2Q8NFH8 660 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 STRBPQ96SI9 672 aaKnown RBP17.61■□□□□ 0.41
PNKP-202ENST00000593706 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
PNKP-202ENST00000593706 SPTBN5Q9NRC6 3674 aaKnown RBP17.6■□□□□ 0.41
PNKP-202ENST00000593706 TRIM43BA6NCK2 446 aa17.6■□□□□ 0.41
PNKP-202ENST00000593706 PQBP1O60828 265 aaKnown RBP17.6■□□□□ 0.41
PNKP-202ENST00000593706 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.6■□□□□ 0.41
PNKP-202ENST00000593706 KBTBD3Q8NAB2 608 aa17.6■□□□□ 0.41
PNKP-202ENST00000593706 TRIM43Q96BQ3 446 aaPredicted RBP17.6■□□□□ 0.41
PNKP-202ENST00000593706 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
PNKP-202ENST00000593706 TACC3Q9Y6A5 838 aa17.6■□□□□ 0.41
PNKP-202ENST00000593706 SYNRGQ9UMZ2 1314 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 GSG1L2A8MUP6 293 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 F5H6K3 240 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 NDUFB10O96000 172 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 ZNF865P0CJ78 1059 aaPredicted RBP17.59■□□□□ 0.41
PNKP-202ENST00000593706 KLRC3Q07444 240 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 GIMAP6Q6P9H5 292 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 PRPF38AQ8NAV1 312 aaKnown RBP17.59■□□□□ 0.41
PNKP-202ENST00000593706 APPBP2Q92624 585 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 ZNF287Q9HBT7 754 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
PNKP-202ENST00000593706 ZHX1Q9UKY1 873 aaPredicted RBP17.59■□□□□ 0.41
PNKP-202ENST00000593706 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 GPAA1O43292 621 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 ZBED4O75132 1171 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 APPP05067 770 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 RAG1P15918 1043 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 TSHZ3Q63HK5 1081 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 CPXCR1Q8N123 301 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 MSL3Q8N5Y2 521 aaKnown RBP17.58■□□□□ 0.4
PNKP-202ENST00000593706 OSBP2Q969R2 916 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 KIFC2Q96AC6 838 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
PNKP-202ENST00000593706 CRBNQ96SW2 442 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 STARD7Q9NQZ5 370 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 CLIP2Q9UDT6 1046 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
PNKP-202ENST00000593706 LCTP09848 1927 aa17.58■□□□□ 0.4
PNKP-202ENST00000593706 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
PNKP-202ENST00000593706 ADAMTS4O75173 837 aa17.57■□□□□ 0.4
PNKP-202ENST00000593706 ZFYP08048 801 aaPredicted RBP17.57■□□□□ 0.4
PNKP-202ENST00000593706 GNAT2P19087 354 aa17.57■□□□□ 0.4
PNKP-202ENST00000593706 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
PNKP-202ENST00000593706 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
PNKP-202ENST00000593706 NUP133Q8WUM0 1156 aa17.57■□□□□ 0.4
PNKP-202ENST00000593706 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
PNKP-202ENST00000593706 TMEM39AQ9NV64 488 aa17.57■□□□□ 0.4
PNKP-202ENST00000593706 FAM184BQ9ULE4 1060 aa17.57■□□□□ 0.4
PNKP-202ENST00000593706 RIPK3Q9Y572 518 aa17.57■□□□□ 0.4
PNKP-202ENST00000593706 PRDM1O75626 825 aa17.56■□□□□ 0.4
PNKP-202ENST00000593706 ACLYP53396 1101 aa17.56■□□□□ 0.4
PNKP-202ENST00000593706 FPGSQ05932 587 aa17.56■□□□□ 0.4
PNKP-202ENST00000593706 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
PNKP-202ENST00000593706 ANKRD35Q8N283 1001 aa17.56■□□□□ 0.4
PNKP-202ENST00000593706 CEP95Q96GE4 821 aa17.56■□□□□ 0.4
PNKP-202ENST00000593706 CDX2Q99626 313 aaPredicted RBP17.56■□□□□ 0.4
PNKP-202ENST00000593706 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
PNKP-202ENST00000593706 RAVER2Q9HCJ3 691 aaKnown RBP17.56■□□□□ 0.4
PNKP-202ENST00000593706 MOXD2PA6NHM9 499 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 DCDC2CA8MYV0 355 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 M0R2C6 588 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 KIAA0355O15063 1070 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 ITGB8P26012 769 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 LRRFIP1Q32MZ4 808 aaKnown RBP17.55■□□□□ 0.4
PNKP-202ENST00000593706 MAMDC4Q6UXC1 1216 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 FEM1BQ9UK73 627 aa17.55■□□□□ 0.4
PNKP-202ENST00000593706 DNAJC25-GNG10A0A024R161 153 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 SNAI1O95863 264 aaPredicted RBP17.54■□□□□ 0.4
PNKP-202ENST00000593706 TTLL1O95922 423 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 C6orf222P0C671 652 aaPredicted RBP17.54■□□□□ 0.4
PNKP-202ENST00000593706 TSPY3P0CV98 308 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 TSPY8P0CW00 308 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 ZNF467Q7Z7K2 595 aaPredicted RBP17.54■□□□□ 0.4
PNKP-202ENST00000593706 MAFAQ8NHW3 353 aaPredicted RBP17.54■□□□□ 0.4
PNKP-202ENST00000593706 COL25A1Q9BXS0 654 aaPredicted RBP17.54■□□□□ 0.4
PNKP-202ENST00000593706 NACAP1Q9BZK3 213 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 SPC25Q9HBM1 224 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 SLC38A10Q9HBR0 1119 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
PNKP-202ENST00000593706 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 MROH7Q68CQ1 1323 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 IGKV6D-41A0A0C4DH26 115 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 DUSP11O75319 330 aaKnown RBP17.53■□□□□ 0.4
PNKP-202ENST00000593706 FOSL2P15408 326 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 PDE4BQ07343 736 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 IKQ13123 557 aaPredicted RBP17.53■□□□□ 0.4
PNKP-202ENST00000593706 ACVR2BQ13705 512 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 KCNA10Q16322 511 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 ANKRD33Q7Z3H0 272 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 GMCL1P1Q8NEA9 526 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 GLT1D1Q96MS3 346 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms