RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 A0A1W2PQY0 241 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 RNF113AO15541 343 aaKnown RBP19.56■□□□□ 0.72
LIG1-205ENST00000593425 ADAMTS4O75173 837 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 PRDM1O75626 825 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 ITGB8P26012 769 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 ZNF697Q5TEC3 545 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 RNF180Q86T96 592 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 DCTPP1Q9H773 170 aa19.56■□□□□ 0.72
LIG1-205ENST00000593425 SNAI1O95863 264 aaPredicted RBP19.55■□□□□ 0.72
LIG1-205ENST00000593425 CLIP2Q9UDT6 1046 aa19.55■□□□□ 0.72
LIG1-205ENST00000593425 CNPY2Q9Y2B0 182 aa19.55■□□□□ 0.72
LIG1-205ENST00000593425 SYNRGQ9UMZ2 1314 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 MCM3APO60318 1980 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 DNAJC25-GNG10A0A024R161 153 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 CLTBP09497 229 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 SLC4A3P48751 1232 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 TDO2P48775 406 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 CPXCR1Q8N123 301 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 PRPF38AQ8NAV1 312 aaKnown RBP19.54■□□□□ 0.72
LIG1-205ENST00000593425 CEP95Q96GE4 821 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 GPATCH3Q96I76 525 aa19.54■□□□□ 0.72
LIG1-205ENST00000593425 SYNGAP1Q96PV0 1343 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 ATP2A1O14983 1001 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 PQBP1O60828 265 aaKnown RBP19.53■□□□□ 0.72
LIG1-205ENST00000593425 EPHB4P54760 987 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 MAMDC4Q6UXC1 1216 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 LRRC47Q8N1G4 583 aaKnown RBP19.53■□□□□ 0.72
LIG1-205ENST00000593425 MSL3Q8N5Y2 521 aaKnown RBP19.53■□□□□ 0.72
LIG1-205ENST00000593425 KIFC2Q96AC6 838 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 DDX11Q96FC9 970 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 RAVER2Q9HCJ3 691 aaKnown RBP19.53■□□□□ 0.72
LIG1-205ENST00000593425 ZHX1Q9UKY1 873 aaPredicted RBP19.53■□□□□ 0.72
LIG1-205ENST00000593425 TACC3Q9Y6A5 838 aa19.53■□□□□ 0.72
LIG1-205ENST00000593425 MYADML2A6NDP7 307 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 ZFYP08048 801 aaPredicted RBP19.52■□□□□ 0.72
LIG1-205ENST00000593425 GNAT2P19087 354 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 IRX5P78411 483 aaPredicted RBP19.52■□□□□ 0.72
LIG1-205ENST00000593425 ZNF444Q8N0Y2 327 aaPredicted RBP19.52■□□□□ 0.72
LIG1-205ENST00000593425 MKL1Q969V6 931 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 FGD4Q96M96 766 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 SEC62Q99442 399 aaKnown RBP19.52■□□□□ 0.72
LIG1-205ENST00000593425 SLC38A10Q9HBR0 1119 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 MTMR4Q9NYA4 1195 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 PLIN4Q96Q06 1357 aa19.52■□□□□ 0.72
LIG1-205ENST00000593425 KIAA0355O15063 1070 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 ADCY6O43306 1168 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 ZBED4O75132 1171 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 APPP05067 770 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 ACLYP53396 1101 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.51■□□□□ 0.71
LIG1-205ENST00000593425 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.51■□□□□ 0.71
LIG1-205ENST00000593425 IFNL3Q8IZI9 196 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 KLHDC9Q8NEP7 349 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 CDX2Q99626 313 aaPredicted RBP19.51■□□□□ 0.71
LIG1-205ENST00000593425 TSEN34Q9BSV6 310 aaKnown RBP19.51■□□□□ 0.71
LIG1-205ENST00000593425 STARD7Q9NQZ5 370 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 FAM184BQ9ULE4 1060 aa19.51■□□□□ 0.71
LIG1-205ENST00000593425 LAMA2P24043 3122 aaKnown RBP19.51■□□□□ 0.71
LIG1-205ENST00000593425 PATL2C9JE40 543 aaKnown RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 TTLL1O95922 423 aa19.5■□□□□ 0.71
LIG1-205ENST00000593425 RAG1P15918 1043 aa19.5■□□□□ 0.71
LIG1-205ENST00000593425 SMAD3P84022 425 aaKnown RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 FAAP100Q0VG06 881 aa19.5■□□□□ 0.71
LIG1-205ENST00000593425 CCSAPQ6IQ19 270 aaPredicted RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 ZNF467Q7Z7K2 595 aaPredicted RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 GMCL1P1Q8NEA9 526 aa19.5■□□□□ 0.71
LIG1-205ENST00000593425 TTYH1Q9H313 450 aaPredicted RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
LIG1-205ENST00000593425 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 CTDP1Q9Y5B0 961 aaPredicted RBP19.5■□□□□ 0.71
LIG1-205ENST00000593425 LRRC37A2A6NM11 1700 aa19.5■□□□□ 0.71
LIG1-205ENST00000593425 KCNA10Q16322 511 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 SLFN13Q68D06 897 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 ANKRD33Q7Z3H0 272 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 PI4K2BQ8TCG2 481 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 OTUD7AQ8TE49 926 aaPredicted RBP19.49■□□□□ 0.71
LIG1-205ENST00000593425 ZNF287Q9HBT7 754 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 TMEM39AQ9NV64 488 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 FEM1BQ9UK73 627 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 SYNPO2Q9UMS6 1093 aa19.49■□□□□ 0.71
LIG1-205ENST00000593425 MOXD2PA6NHM9 499 aa19.48■□□□□ 0.71
LIG1-205ENST00000593425 DUSP11O75319 330 aaKnown RBP19.48■□□□□ 0.71
LIG1-205ENST00000593425 ACVR2BQ13705 512 aa19.48■□□□□ 0.71
LIG1-205ENST00000593425 ANKRD35Q8N283 1001 aa19.48■□□□□ 0.71
LIG1-205ENST00000593425 NEDD1Q8NHV4 660 aa19.48■□□□□ 0.71
LIG1-205ENST00000593425 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
LIG1-205ENST00000593425 RNPC3Q96LT9 517 aaKnown RBP19.48■□□□□ 0.71
LIG1-205ENST00000593425 COL25A1Q9BXS0 654 aaPredicted RBP19.48■□□□□ 0.71
LIG1-205ENST00000593425 TTC41PQ6P2S7 1318 aa19.48■□□□□ 0.71
LIG1-205ENST00000593425 UNC80Q8N2C7 3258 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 C6orf222P0C671 652 aaPredicted RBP19.47■□□□□ 0.71
LIG1-205ENST00000593425 TSPY3P0CV98 308 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 TSPY8P0CW00 308 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 BMP3P12645 472 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 CST5P28325 142 aaPredicted RBP19.47■□□□□ 0.71
LIG1-205ENST00000593425 OAZ1P54368 228 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 FPGSQ05932 587 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 ARMCX2Q7L311 632 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 CHST13Q8NET6 341 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 MYLIPQ8WY64 445 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms