RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRIM43Q96BQ3 446 aaPredicted RBP15.75■□□□□ 0.11
H3F3B-213ENST00000593254 MKNK2Q9HBH9 465 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
H3F3B-213ENST00000593254 CHD7Q9P2D1 2997 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 KBTBD13C9JR72 458 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 SEPT4O43236 478 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 FLOT1O75955 427 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 SMC5Q8IY18 1101 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 STK11IPQ8N1F8 1099 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 MOV10L1Q9BXT6 1211 aaKnown RBP15.74■□□□□ 0.11
H3F3B-213ENST00000593254 NACAP1Q9BZK3 213 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 SPATC1LQ9H0A9 340 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 ZNF287Q9HBT7 754 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 REV3LO60673 3130 aa15.74■□□□□ 0.11
H3F3B-213ENST00000593254 COL9A1P20849 921 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 ITGB8P26012 769 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 USP38Q8NB14 1042 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 SHCBP1Q8NEM2 672 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 ATG4CQ96DT6 458 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
H3F3B-213ENST00000593254 IGKV6D-41A0A0C4DH26 115 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 FOXP2O15409 715 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 STRNO43815 780 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 ADORA2AP29274 412 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 LRRC41Q15345 812 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 ANO1Q5XXA6 986 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 DPP9Q86TI2 863 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 EXOC6Q8TAG9 804 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 NAPBQ9H115 298 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
H3F3B-213ENST00000593254 ADAMTS5Q9UNA0 930 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 PLIN4Q96Q06 1357 aa15.72■□□□□ 0.11
H3F3B-213ENST00000593254 TNFRSF10AO00220 468 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 PRDM1O75626 825 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 ERCC3P19447 782 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 ADCYAP1R1P41586 468 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 EPHB4P54760 987 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 TLE2Q04725 743 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 GRIN2CQ14957 1233 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 CCDC129Q6ZRS4 1044 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 TICAM2Q86XR7 235 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 ZNF444Q8N0Y2 327 aaPredicted RBP15.71■□□□□ 0.11
H3F3B-213ENST00000593254 RNPC3Q96LT9 517 aaKnown RBP15.71■□□□□ 0.11
H3F3B-213ENST00000593254 FBXO28Q9NVF7 368 aa15.71■□□□□ 0.11
H3F3B-213ENST00000593254 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 COBLO75128 1261 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 PDE4BQ07343 736 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 PPARAQ07869 468 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 TMEM132BQ14DG7 1078 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 MROH8Q9H579 483 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 TACC3Q9Y6A5 838 aa15.7■□□□□ 0.1
H3F3B-213ENST00000593254 F5H6K3 240 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 VWA5AO00534 786 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 KIAA0355O15063 1070 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 RAD21O60216 631 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 IGHDP01880 384 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
H3F3B-213ENST00000593254 KLRC3Q07444 240 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 PLS1Q14651 629 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 FAM47AQ5JRC9 791 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 ABRAQ8N0Z2 381 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 MKL1Q969V6 931 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 FERMT2Q96AC1 680 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 CEP95Q96GE4 821 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 HELLSQ9NRZ9 838 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 CLIP2Q9UDT6 1046 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 PHF24Q9UPV7 400 aa15.69■□□□□ 0.1
H3F3B-213ENST00000593254 SLC25A27O95847 323 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 NDUFB10O96000 172 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 CLTBP09497 229 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 DNAJB2P25686 324 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 NUCB1Q02818 461 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 PRAMEF19Q5SWL8 479 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 VPS53Q5VIR6 699 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 NCAPG2Q86XI2 1143 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 REPS2Q8NFH8 660 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 FAM227BQ96M60 508 aa15.68■□□□□ 0.1
H3F3B-213ENST00000593254 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
H3F3B-213ENST00000593254 ZNF214Q9UL59 606 aaPredicted RBP15.68■□□□□ 0.1
H3F3B-213ENST00000593254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
H3F3B-213ENST00000593254 TRANK1O15050 2925 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 TTLL1O95922 423 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 RIOX2Q8IUF8 465 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 PLEKHM2Q8IWE5 1019 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 MAML3Q96JK9 1138 aa15.67■□□□□ 0.1
H3F3B-213ENST00000593254 SLF1Q9BQI6 1058 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms