RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 GSG1L2A8MUP6 293 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 GRXCR1A8MXD5 290 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 HMMRO75330 724 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 AKR1A1P14550 325 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 FOSL2P15408 326 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 ACLYP53396 1101 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 SMAD3P84022 425 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 GRIN2CQ14957 1233 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 C1orf53Q5VUE5 145 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 RNF180Q86T96 592 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 AMOTL1Q8IY63 956 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 OSBP2Q969R2 916 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 STRBPQ96SI9 672 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 STARD7Q9NQZ5 370 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 TACC3Q9Y6A5 838 aa13.45□□□□□ -0.26
PRKCSH-220ENST00000593104 F5H6K3 240 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 M0R2C6 588 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 KIAA0355O15063 1070 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 FPGSQ05932 587 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 KLRC3Q07444 240 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 KCNA10Q16322 511 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 CNPY2Q9Y2B0 182 aa13.44□□□□□ -0.26
PRKCSH-220ENST00000593104 ACRP10323 421 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 PBX2P40425 430 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 CCSAPQ6IQ19 270 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 RASGRP2Q7LDG7 609 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 KLHDC9Q8NEP7 349 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 TEX13BQ9BXU2 312 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 PPP1R12CQ9BZL4 782 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 ARPP21Q9UBL0 812 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 NRBP1Q9UHY1 535 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 DIS3Q9Y2L1 958 aaKnown RBP13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 ROBO3Q96MS0 1386 aa13.43□□□□□ -0.26
PRKCSH-220ENST00000593104 CDH23Q9H251 3354 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 DNAJC25-GNG10A0A024R161 153 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 C6orf222P0C671 652 aaPredicted RBP13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 DNAJB2P25686 324 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 SNAP25P60880 206 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 BEX3Q00994 111 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 CNTN2Q02246 1040 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 C16orf59Q7L2K0 433 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 SEC62Q99442 399 aaKnown RBP13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 LRRCC1Q9C099 1032 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 FAM184BQ9ULE4 1060 aa13.42□□□□□ -0.26
PRKCSH-220ENST00000593104 IGKV6D-41A0A0C4DH26 115 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 CCDC144BQ3MJ40 725 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 TMEM63BQ5T3F8 832 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 NYAP2Q9P242 653 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 TBX21Q9UL17 535 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
PRKCSH-220ENST00000593104 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 CTAGE5O15320 804 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 GPAA1O43292 621 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 ASGR1P07306 291 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 CSF2RAP15509 400 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 MAMDC4Q6UXC1 1216 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 ARMCX2Q7L311 632 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 ANKRD33Q7Z3H0 272 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 CCDC144CPQ8IYA2 1237 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 INCENPQ9NQS7 918 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 ECHDC1Q9NTX5 307 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 GBF1Q92538 1859 aa13.4□□□□□ -0.26
PRKCSH-220ENST00000593104 ASTN1O14525 1302 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 ZBED4O75132 1171 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 TIMP1P01033 207 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 APPP05067 770 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 CYP2C18P33260 490 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 TDO2P48775 406 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 TMEM240Q5SV17 173 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 KBTBD3Q8NAB2 608 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms