RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 FGAP02671 866 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 HSPD1P10809 573 aaKnown RBP15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 COL6A1P12109 1028 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 BMP3P12645 472 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 PRAMEF19Q5SWL8 479 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 CPXCR1Q8N123 301 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 CHMP4CQ96CF2 233 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 OSBPL3Q9H4L5 887 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 TOMM22Q9NS69 142 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 STX8Q9UNK0 236 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 RIPK3Q9Y572 518 aa15.52■□□□□ 0.08
PRKCSH-218ENST00000593053 ZNF236Q9UL36 1845 aa15.52■□□□□ 0.07
PRKCSH-218ENST00000593053 ORC4O43929 436 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 MCCP23508 829 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 FXR1P51114 621 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 ZNF792Q3KQV3 632 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 PPP4R3BQ5MIZ7 849 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 ANO1Q5XXA6 986 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 SLC38A10Q9HBR0 1119 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 IL17RBQ9NRM6 502 aa15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 ZMYND8Q9ULU4 1186 aaPredicted RBP15.51■□□□□ 0.07
PRKCSH-218ENST00000593053 CCDC171Q6TFL3 1326 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 ATP2A1O14983 1001 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 SEPT4O43236 478 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 SDSP20132 328 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 SLC1A4P43007 532 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 RRP12Q5JTH9 1297 aaKnown RBP15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 GMCL1Q96IK5 515 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 PRO3102Q9H379 93 aa15.5■□□□□ 0.07
PRKCSH-218ENST00000593053 FGRP09769 529 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 STAT2P52630 851 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 HAND2P61296 217 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 LRRC26Q2I0M4 334 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 DDX11Q96FC9 970 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 TINF2Q9BSI4 451 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 MTMR7Q9Y216 660 aa15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 DIS3Q9Y2L1 958 aaKnown RBP15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 RANBP2P49792 3224 aaKnown RBP15.49■□□□□ 0.07
PRKCSH-218ENST00000593053 ZMYM6O95789 1325 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 PARP14Q460N5 1801 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 DNM1LO00429 736 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 SYN1P17600 705 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 MFAP1P55081 439 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 GJC2Q5T442 439 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 RASGRP2Q7LDG7 609 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 ARRDC4Q8NCT1 418 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 STAG1Q8WVM7 1258 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 SENP6Q9GZR1 1112 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 DIAPH3Q9NSV4 1193 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 NRBP1Q9UHY1 535 aa15.48■□□□□ 0.07
PRKCSH-218ENST00000593053 TAL1P17542 331 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 NOVP48745 357 aa15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 OAZ1P54368 228 aa15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 RCSD1Q6JBY9 416 aa15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 ANKRD35Q8N283 1001 aa15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 HOMER2Q9NSB8 354 aa15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 FBXO40Q9UH90 709 aa15.47■□□□□ 0.07
PRKCSH-218ENST00000593053 DNAJC25-GNG10A0A024R161 153 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 KBTBD13C9JR72 458 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 FDX1P10109 184 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 ATN1P54259 1190 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 CCDC96Q2M329 555 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 AKNAD1Q5T1N1 836 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 CHST13Q8NET6 341 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 AGBL1Q96MI9 1066 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 CNPY2Q9Y2B0 182 aa15.46■□□□□ 0.07
PRKCSH-218ENST00000593053 TRIOBPQ9H2D6 2365 aa15.46■□□□□ 0.06
PRKCSH-218ENST00000593053 COL11A1P12107 1806 aaPredicted RBP15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 HIP1O00291 1037 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 PLA2G6O60733 806 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 ZNF865P0CJ78 1059 aaPredicted RBP15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 SNAP25P60880 206 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 MFSD6Q6ZSS7 791 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 GDF15Q99988 308 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 TMEM47Q9BQJ4 181 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 XPNPEP3Q9NQH7 507 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
PRKCSH-218ENST00000593053 ZNF536O15090 1300 aa15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 ZNF213O14771 459 aa15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 RARBP10826 455 aa15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 TOP1P11387 765 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 PCP11498 1178 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 PDE4AP27815 886 aa15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 MAGEA10P43363 369 aaPredicted RBP15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 LRRC41Q15345 812 aa15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 CCDC174Q6PII3 467 aa15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 MSL3Q8N5Y2 521 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-218ENST00000593053 DCAF4Q8WV16 495 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms