RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZBED4O75132 1171 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 DDAH1O94760 285 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 GOLGA8HP0CJ92 632 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 SLC16A2P36021 539 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 PSMC4P43686 418 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 FCGRTP55899 365 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 CCNA1P78396 465 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 PLS1Q14651 629 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 Q3C1V9 767 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 BTNL9Q6UXG8 535 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 RUFY3Q7L099 469 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
DDX39A-221ENST00000593026 ARHGAP39Q9C0H5 1083 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 ZSWIM6Q9HCJ5 1215 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 PRR12Q9ULL5 1215 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 ZSWIM8A7E2V4 1837 aa17.44■□□□□ 0.38
DDX39A-221ENST00000593026 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-221ENST00000593026 FMNL1O95466 1100 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-221ENST00000593026 FDX1P10109 184 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 TROAPQ12815 778 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 TMEM132BQ14DG7 1078 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 SYDE2Q5VT97 1194 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 CTU1Q7Z7A3 348 aaKnown RBP17.43■□□□□ 0.38
DDX39A-221ENST00000593026 SGMS1Q86VZ5 419 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 NUP133Q8WUM0 1156 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
DDX39A-221ENST00000593026 SPATC1LQ9H0A9 340 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 EFCC1Q9HA90 598 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
DDX39A-221ENST00000593026 SLC38A10Q9HBR0 1119 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
DDX39A-221ENST00000593026 MGAMO43451 1857 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 TNPO2O14787 897 aaKnown RBP17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CALM1P0DP23 149 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CALM2P0DP24 149 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CALM3P0DP25 149 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CTGFP29279 349 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 MAPK4P31152 587 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CAP1Q01518 475 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 GRM4Q14833 912 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 Q6ZUG5 572 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 REPS2Q8NFH8 660 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CTCFLQ8NI51 663 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-221ENST00000593026 TRIM47Q96LD4 638 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 MYL10Q9BUA6 226 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 MOV10L1Q9BXT6 1211 aaKnown RBP17.42■□□□□ 0.38
DDX39A-221ENST00000593026 UBA5Q9GZZ9 404 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 PORCNQ9H237 461 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 CWC22Q9HCG8 908 aaKnown RBP17.42■□□□□ 0.38
DDX39A-221ENST00000593026 ZNF214Q9UL59 606 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-221ENST00000593026 TRIM17Q9Y577 477 aa17.42■□□□□ 0.38
DDX39A-221ENST00000593026 KLRF2D3W0D1 207 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 GNRH1P01148 92 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 STAT3P40763 770 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 WDR78Q5VTH9 848 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 APOA5Q6Q788 366 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 CPXCR1Q8N123 301 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 STAG2Q8N3U4 1231 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 BRF1Q92994 677 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 IL17RAQ96F46 866 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 TEX13BQ9BXU2 312 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 MAD2L2Q9UI95 211 aa17.41■□□□□ 0.38
DDX39A-221ENST00000593026 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 PALM3A6NDB9 673 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-221ENST00000593026 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
DDX39A-221ENST00000593026 HOXD10P28358 340 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 KIF5BP33176 963 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 OAZ1P54368 228 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 SNAP25P60880 206 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 SNRNP48Q6IEG0 339 aaKnown RBP17.4■□□□□ 0.38
DDX39A-221ENST00000593026 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 FBXL16Q8N461 479 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 SHCBP1Q8NEM2 672 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 COA7Q96BR5 231 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 CPVLQ9H3G5 476 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 RAVER2Q9HCJ3 691 aaKnown RBP17.4■□□□□ 0.38
DDX39A-221ENST00000593026 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
DDX39A-221ENST00000593026 ZBTB43O43298 467 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 SLC25A27O95847 323 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 ERCC3P19447 782 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 RXRAP19793 462 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 COPB2P35606 906 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 CCDC174Q6PII3 467 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 GPR142Q7Z601 462 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 NCAPG2Q86XI2 1143 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 RAB11FIP4Q86YS3 637 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 RIOX2Q8IUF8 465 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 ADGRF4Q8IZF3 695 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 RANBP17Q9H2T7 1088 aaKnown RBP17.39■□□□□ 0.37
DDX39A-221ENST00000593026 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
DDX39A-221ENST00000593026 NAP1L2Q9ULW6 460 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-221ENST00000593026 CAPN15O75808 1086 aa17.38■□□□□ 0.37
DDX39A-221ENST00000593026 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms