RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PAOXQ6QHF9 649 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 TXNRD3Q86VQ6 643 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 TOP6BLQ8N6T0 577 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 MEGF10Q96KG7 1140 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 LGR4Q9BXB1 951 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 INTS7Q9NVH2 962 aaKnown RBP8.84□□□□□ -0.99
VMP1-215ENST00000592619 A0A087X0B3 334 aa8.83□□□□□ -1
VMP1-215ENST00000592619 TRIM61Q5EBN2 209 aa8.83□□□□□ -1
VMP1-215ENST00000592619 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
VMP1-215ENST00000592619 THNSL2Q86YJ6 484 aa8.83□□□□□ -1
VMP1-215ENST00000592619 DHX37Q8IY37 1157 aaKnown RBP8.83□□□□□ -1
VMP1-215ENST00000592619 ADCY4Q8NFM4 1077 aa8.83□□□□□ -1
VMP1-215ENST00000592619 CLUHP3Q96NS8 147 aa8.83□□□□□ -1
VMP1-215ENST00000592619 TPX2Q9ULW0 747 aaKnown RBP8.83□□□□□ -1
VMP1-215ENST00000592619 SCRIBQ14160 1630 aa8.83□□□□□ -1
VMP1-215ENST00000592619 MYCLP1P12525 358 aaPredicted RBP8.82□□□□□ -1
VMP1-215ENST00000592619 HOXC12P31275 282 aa8.82□□□□□ -1
VMP1-215ENST00000592619 STAT3P40763 770 aa8.82□□□□□ -1
VMP1-215ENST00000592619 KIR3DL1P43629 444 aa8.82□□□□□ -1
VMP1-215ENST00000592619 NFKBIBQ15653 356 aa8.82□□□□□ -1
VMP1-215ENST00000592619 CLEC10AQ8IUN9 316 aa8.82□□□□□ -1
VMP1-215ENST00000592619 FIBCD1Q8N539 461 aa8.82□□□□□ -1
VMP1-215ENST00000592619 BTN2A2Q8WVV5 523 aa8.82□□□□□ -1
VMP1-215ENST00000592619 BRF1Q92994 677 aa8.82□□□□□ -1
VMP1-215ENST00000592619 IER2Q9BTL4 223 aa8.82□□□□□ -1
VMP1-215ENST00000592619 KCNH3Q9ULD8 1083 aa8.82□□□□□ -1
VMP1-215ENST00000592619 BICRAQ9NZM4 1560 aa8.82□□□□□ -1
VMP1-215ENST00000592619 CNTNAP4Q9C0A0 1308 aa8.81□□□□□ -1
VMP1-215ENST00000592619 IRS4O14654 1257 aaPredicted RBP8.81□□□□□ -1
VMP1-215ENST00000592619 DHX15O43143 795 aaKnown RBP8.81□□□□□ -1
VMP1-215ENST00000592619 DLX3O60479 287 aa8.81□□□□□ -1
VMP1-215ENST00000592619 LRRN2O75325 713 aa8.81□□□□□ -1
VMP1-215ENST00000592619 KCNH1O95259 989 aa8.81□□□□□ -1
VMP1-215ENST00000592619 MAP4K2Q12851 820 aa8.81□□□□□ -1
VMP1-215ENST00000592619 SNW1Q13573 536 aaKnown RBP8.81□□□□□ -1
VMP1-215ENST00000592619 GTF2IRD2BQ6EKJ0 949 aa8.81□□□□□ -1
VMP1-215ENST00000592619 BEND4Q6ZU67 534 aa8.81□□□□□ -1
VMP1-215ENST00000592619 C22orf34Q6ZV56 151 aa8.81□□□□□ -1
VMP1-215ENST00000592619 GTF2IRD2Q86UP8 949 aa8.81□□□□□ -1
VMP1-215ENST00000592619 DTWD2Q8NBA8 298 aa8.81□□□□□ -1
VMP1-215ENST00000592619 CHAC2Q8WUX2 184 aa8.81□□□□□ -1
VMP1-215ENST00000592619 FAM83CQ9BQN1 747 aa8.81□□□□□ -1
VMP1-215ENST00000592619 NKX2-4Q9H2Z4 354 aa8.81□□□□□ -1
VMP1-215ENST00000592619 NOL6Q9H6R4 1146 aaKnown RBP8.81□□□□□ -1
VMP1-215ENST00000592619 CAAP1Q9H8G2 361 aa8.81□□□□□ -1
VMP1-215ENST00000592619 METTL14Q9HCE5 456 aaKnown RBP8.81□□□□□ -1
VMP1-215ENST00000592619 PRDM5Q9NQX1 630 aaPredicted RBP8.81□□□□□ -1
VMP1-215ENST00000592619 CYP26B1Q9NR63 512 aa8.81□□□□□ -1
VMP1-215ENST00000592619 MAGEC2Q9UBF1 373 aaPredicted RBP8.81□□□□□ -1
VMP1-215ENST00000592619 SF3B6Q9Y3B4 125 aaKnown RBP8.81□□□□□ -1
VMP1-215ENST00000592619 SIGLEC6O43699 453 aa8.8□□□□□ -1
VMP1-215ENST00000592619 SCG5P05408 212 aa8.8□□□□□ -1
VMP1-215ENST00000592619 C6orf222P0C671 652 aaPredicted RBP8.8□□□□□ -1
VMP1-215ENST00000592619 GFRA1P56159 465 aa8.8□□□□□ -1
VMP1-215ENST00000592619 GABREP78334 506 aa8.8□□□□□ -1
VMP1-215ENST00000592619 SFRP5Q5T4F7 317 aa8.8□□□□□ -1
VMP1-215ENST00000592619 KCTD13Q8WZ19 329 aa8.8□□□□□ -1
VMP1-215ENST00000592619 Q96M66 194 aa8.8□□□□□ -1
VMP1-215ENST00000592619 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
VMP1-215ENST00000592619 TYW1Q9NV66 732 aaKnown RBP8.8□□□□□ -1
VMP1-215ENST00000592619 GFOD1Q9NXC2 390 aa8.8□□□□□ -1
VMP1-215ENST00000592619 MAPRE3Q9UPY8 281 aa8.8□□□□□ -1
VMP1-215ENST00000592619 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
VMP1-215ENST00000592619 EFCAB14O75071 495 aa8.79□□□□□ -1
VMP1-215ENST00000592619 LEFTY1O75610 366 aa8.79□□□□□ -1
VMP1-215ENST00000592619 CPP00450 1065 aa8.79□□□□□ -1
VMP1-215ENST00000592619 FAM87AP0C7U9 286 aa8.79□□□□□ -1
VMP1-215ENST00000592619 OGFOD3Q6PK18 319 aa8.79□□□□□ -1
VMP1-215ENST00000592619 GSTCDQ8NEC7 633 aa8.79□□□□□ -1
VMP1-215ENST00000592619 ENOX1Q8TC92 643 aaKnown RBP8.79□□□□□ -1
VMP1-215ENST00000592619 GATA6Q92908 595 aa8.79□□□□□ -1
VMP1-215ENST00000592619 SSBP4Q9BWG4 385 aaPredicted RBP8.79□□□□□ -1
VMP1-215ENST00000592619 SFMBT1Q9UHJ3 866 aa8.79□□□□□ -1
VMP1-215ENST00000592619 GTF2IRD1Q9UHL9 959 aa8.79□□□□□ -1
VMP1-215ENST00000592619 GSG1L2A8MUP6 293 aa8.78□□□□□ -1
VMP1-215ENST00000592619 PDE8AO60658 829 aa8.78□□□□□ -1
VMP1-215ENST00000592619 ZNF865P0CJ78 1059 aaPredicted RBP8.78□□□□□ -1
VMP1-215ENST00000592619 SOX5P35711 763 aa8.78□□□□□ -1
VMP1-215ENST00000592619 AMPD2Q01433 879 aa8.78□□□□□ -1
VMP1-215ENST00000592619 NMIQ13287 307 aaPredicted RBP8.78□□□□□ -1
VMP1-215ENST00000592619 PPP2R5DQ14738 602 aa8.78□□□□□ -1
VMP1-215ENST00000592619 TMC3Q7Z5M5 1100 aa8.78□□□□□ -1
VMP1-215ENST00000592619 RNF180Q86T96 592 aa8.78□□□□□ -1
VMP1-215ENST00000592619 PIWIL2Q8TC59 973 aaKnown RBP8.78□□□□□ -1
VMP1-215ENST00000592619 TRIM39Q9HCM9 518 aa8.78□□□□□ -1
VMP1-215ENST00000592619 CHST7Q9NS84 486 aa8.78□□□□□ -1
VMP1-215ENST00000592619 DDX56Q9NY93 547 aaKnown RBP8.78□□□□□ -1
VMP1-215ENST00000592619 ITIH2P19823 946 aa8.77□□□□□ -1.01
VMP1-215ENST00000592619 POU3F3P20264 500 aaPredicted RBP8.77□□□□□ -1.01
VMP1-215ENST00000592619 SF1Q15637 639 aaKnown RBP8.77□□□□□ -1.01
VMP1-215ENST00000592619 SLC35F1Q5T1Q4 408 aa8.77□□□□□ -1.01
VMP1-215ENST00000592619 LRRTM3Q86VH5 581 aa8.77□□□□□ -1.01
VMP1-215ENST00000592619 PTPRN2Q92932 1015 aa8.77□□□□□ -1.01
VMP1-215ENST00000592619 C1orf159Q96HA4 380 aa8.77□□□□□ -1.01
VMP1-215ENST00000592619 HEXIM2Q96MH2 286 aaKnown RBP8.77□□□□□ -1.01
VMP1-215ENST00000592619 DSCC1Q9BVC3 393 aa8.77□□□□□ -1.01
VMP1-215ENST00000592619 ASCC2Q9H1I8 757 aaPredicted RBP8.77□□□□□ -1.01
VMP1-215ENST00000592619 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.76□□□□□ -1.01
VMP1-215ENST00000592619 ADAM23O75077 832 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 PRAMEF1O95521 474 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms