RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RARBP10826 455 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 MAPK8IP2Q13387 824 aaPredicted RBP22.44■■□□□ 1.18
CCDC43-205ENST00000592333 LRRC41Q15345 812 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 SNRNP48Q6IEG0 339 aaKnown RBP22.44■■□□□ 1.18
CCDC43-205ENST00000592333 MAMDC4Q6UXC1 1216 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 LRCH3Q96II8 777 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 SYNGAP1Q96PV0 1343 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 SLC38A10Q9HBR0 1119 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 CNPY2Q9Y2B0 182 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 CTDP1Q9Y5B0 961 aaPredicted RBP22.44■■□□□ 1.18
CCDC43-205ENST00000592333 DNAH12Q6ZR08 3092 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 DNAJC25-GNG10A0A024R161 153 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 PGK2P07205 417 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 AKR1A1P14550 325 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 RTP1P59025 263 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 PPARAQ07869 468 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 PRAMEF19Q5SWL8 479 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 RNF180Q86T96 592 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 CHST13Q8NET6 341 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 EVI5LQ96CN4 794 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 NUP88Q99567 741 aaPredicted RBP22.43■■□□□ 1.18
CCDC43-205ENST00000592333 PHF24Q9UPV7 400 aa22.43■■□□□ 1.18
CCDC43-205ENST00000592333 MYH4Q9Y623 1939 aa22.42■■□□□ 1.18
CCDC43-205ENST00000592333 PLA2G6O60733 806 aa22.42■■□□□ 1.18
CCDC43-205ENST00000592333 PRDM1O75626 825 aa22.42■■□□□ 1.18
CCDC43-205ENST00000592333 ATN1P54259 1190 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-205ENST00000592333 HDAC1Q13547 482 aaPredicted RBP22.42■■□□□ 1.18
CCDC43-205ENST00000592333 STK11IPQ8N1F8 1099 aa22.42■■□□□ 1.18
CCDC43-205ENST00000592333 DDX11Q96FC9 970 aa22.42■■□□□ 1.18
CCDC43-205ENST00000592333 SEC62Q99442 399 aaKnown RBP22.42■■□□□ 1.18
CCDC43-205ENST00000592333 XPNPEP3Q9NQH7 507 aa22.42■■□□□ 1.18
CCDC43-205ENST00000592333 PLXNA1Q9UIW2 1896 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 ZNF865P0CJ78 1059 aaPredicted RBP22.41■■□□□ 1.18
CCDC43-205ENST00000592333 BMP3P12645 472 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 TFAP4Q01664 338 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 FAM47AQ5JRC9 791 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 OTUD7AQ8TE49 926 aaPredicted RBP22.41■■□□□ 1.18
CCDC43-205ENST00000592333 CHURC1Q8WUH1 139 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 GMCL1Q96IK5 515 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 TSEN34Q9BSV6 310 aaKnown RBP22.41■■□□□ 1.18
CCDC43-205ENST00000592333 ANAPC4Q9UJX5 808 aa22.41■■□□□ 1.18
CCDC43-205ENST00000592333 MDM2Q00987 491 aaPredicted RBP22.4■■□□□ 1.18
CCDC43-205ENST00000592333 FAM160B2Q86V87 743 aa22.4■■□□□ 1.18
CCDC43-205ENST00000592333 HELLSQ9NRZ9 838 aa22.4■■□□□ 1.18
CCDC43-205ENST00000592333 RIPK3Q9Y572 518 aa22.4■■□□□ 1.18
CCDC43-205ENST00000592333 ADCYAP1R1P41586 468 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 STAT2P52630 851 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 ALX1Q15699 326 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 ANKRD45Q5TZF3 282 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 SLFN13Q68D06 897 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 KIFC2Q96AC6 838 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 FAM184BQ9ULE4 1060 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 ATP11BQ9Y2G3 1177 aa22.39■■□□□ 1.17
CCDC43-205ENST00000592333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.39■■□□□ 1.17
CCDC43-205ENST00000592333 FAM109BQ6ICB4 259 aaPredicted RBP22.38■■□□□ 1.17
CCDC43-205ENST00000592333 CPXCR1Q8N123 301 aa22.38■■□□□ 1.17
CCDC43-205ENST00000592333 FGRP09769 529 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 NOVP48745 357 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 PDE1AP54750 535 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 TKFCQ3LXA3 575 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 ANKRD35Q8N283 1001 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 STAG1Q8WVM7 1258 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 ABHD16BQ9H3Z7 469 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 TACC3Q9Y6A5 838 aa22.37■■□□□ 1.17
CCDC43-205ENST00000592333 SMCHD1A6NHR9 2005 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 MOXD2PA6NHM9 499 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 TSPY2A6NKD2 308 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 ADAMTS4O75173 837 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 SNAI1O95863 264 aaPredicted RBP22.36■■□□□ 1.17
CCDC43-205ENST00000592333 SLC1A4P43007 532 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 TRIM60Q495X7 471 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 LRRC47Q8N1G4 583 aaKnown RBP22.36■■□□□ 1.17
CCDC43-205ENST00000592333 DEFB123Q8N688 67 aa22.36■■□□□ 1.17
CCDC43-205ENST00000592333 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
CCDC43-205ENST00000592333 TMEM232C9JQI7 657 aa22.35■■□□□ 1.17
CCDC43-205ENST00000592333 FOXP2O15409 715 aa22.35■■□□□ 1.17
CCDC43-205ENST00000592333 ORC4O43929 436 aa22.35■■□□□ 1.17
CCDC43-205ENST00000592333 DUSP11O75319 330 aaKnown RBP22.35■■□□□ 1.17
CCDC43-205ENST00000592333 MYCNP04198 464 aaPredicted RBP22.35■■□□□ 1.17
CCDC43-205ENST00000592333 TAL1P17542 331 aaPredicted RBP22.35■■□□□ 1.17
CCDC43-205ENST00000592333 NUP133Q8WUM0 1156 aa22.35■■□□□ 1.17
CCDC43-205ENST00000592333 TOX2Q96NM4 488 aa22.35■■□□□ 1.17
CCDC43-205ENST00000592333 ZMYM6O95789 1325 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 PGK1P00558 417 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 CST5P28325 142 aaPredicted RBP22.34■■□□□ 1.17
CCDC43-205ENST00000592333 RCSD1Q6JBY9 416 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 KLHDC9Q8NEP7 349 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 ACAD9Q9H845 621 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 PDLIM7Q9NR12 457 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 STX8Q9UNK0 236 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 LTBP2Q14767 1821 aa22.34■■□□□ 1.17
CCDC43-205ENST00000592333 PCP11498 1178 aaKnown RBP22.33■■□□□ 1.17
CCDC43-205ENST00000592333 ACVR2BQ13705 512 aa22.33■■□□□ 1.17
CCDC43-205ENST00000592333 MCMDC2Q4G0Z9 681 aa22.33■■□□□ 1.17
CCDC43-205ENST00000592333 ANKRD33Q7Z3H0 272 aa22.33■■□□□ 1.17
CCDC43-205ENST00000592333 FERMT2Q96AC1 680 aa22.33■■□□□ 1.17
CCDC43-205ENST00000592333 IL17RBQ9NRM6 502 aa22.33■■□□□ 1.17
CCDC43-205ENST00000592333 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms