RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 ZFAND2BQ8WV99 257 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 APPBP2Q92624 585 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 STAMBPL1Q96FJ0 436 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 EBF2Q9HAK2 575 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 MRC1P22897 1456 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 ATF3P18847 181 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 DEUP1Q05D60 604 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 VPS37DQ86XT2 251 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 FAM114A1Q8IWE2 563 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 NUP58Q9BVL2 599 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 HAUS2Q9NVX0 235 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 PNOCQ13519 176 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 FAM89AQ96GI7 184 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.62□□□□□ -0.231e-11■□□□□ 11.1
SMARCA4-217ENST00000591595 TMOD4Q9NZQ9 345 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 C15orf41Q9Y2V0 281 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 LIN7AO14910 233 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 EIF4BP23588 611 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 MYBPC3Q14896 1274 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 SLMAPQ14BN4 828 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 KCNV2Q8TDN2 545 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 UNC45AQ9H3U1 944 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 ACTR5Q9H9F9 607 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 CDC23Q9UJX2 597 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
SMARCA4-217ENST00000591595 ZC3H4Q9UPT8 1303 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 MEGF6O75095 1541 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 MYL5Q02045 173 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 IFT88Q13099 833 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 EXOC8Q8IYI6 725 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 PAGR1Q9BTK6 254 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 KRT40Q6A162 431 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 AGAP3Q96P47 875 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 SPATA7Q9P0W8 599 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
SMARCA4-217ENST00000591595 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 CYP11B2P19099 503 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 ANTXR2P58335 489 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 SLC39A14Q15043 492 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 SPECC1Q5M775 1068 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 SH3GL2Q99962 352 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 BPIFA3Q9BQP9 254 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 MYL10Q9BUA6 226 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 ANGEL1Q9UNK9 670 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 MYBL1P10243 752 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 B4E1Z4 1266 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 ATP4AP20648 1035 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 IARSP41252 1262 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 CTCFP49711 727 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 NCAPHQ15003 741 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 COG1Q8WTW3 980 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 DTNBP1Q96EV8 351 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 HDAC6Q9UBN7 1215 aa13.6□□□□□ -0.23
SMARCA4-217ENST00000591595 A6NNZ2 444 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 OPLAHO14841 1288 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 MYO1BO43795 1136 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 CIAO1O76071 339 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 BLMHQ13867 455 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 TUBB8Q3ZCM7 444 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 NAA35Q5VZE5 725 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 WDR93Q6P2C0 686 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 DPF2Q92785 391 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 CREB3O43889 395 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 PDCLQ13371 301 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 CCDC121Q6ZUS5 278 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 NOD2Q9HC29 1040 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
SMARCA4-217ENST00000591595 A6NHS1 94 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 ZBTB43O43298 467 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 ZNF570Q96NI8 536 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 SLC26A6Q9BXS9 759 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 BAIAP2L1Q9UHR4 511 aa13.58□□□□□ -0.23
SMARCA4-217ENST00000591595 CTAGE15A4D2H0 777 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 IKBKBO14920 756 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 CTAGE8P0CG41 777 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms