RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 BOLA2Q9H3K6 86 aa18.13■□□□□ 0.49
GHDC-211ENST00000590520 ARPP21Q9UBL0 812 aaPredicted RBP18.13■□□□□ 0.49
GHDC-211ENST00000590520 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.12■□□□□ 0.49
GHDC-211ENST00000590520 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.12■□□□□ 0.49
GHDC-211ENST00000590520 RAB11FIP3O75154 756 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 HNRNPUQ00839 825 aaKnown RBP eCLIP18.12■□□□□ 0.49
GHDC-211ENST00000590520 FAAP100Q0VG06 881 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 RPAP2Q8IXW5 612 aaPredicted RBP18.12■□□□□ 0.49
GHDC-211ENST00000590520 HAUS7Q99871 368 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 SLF1Q9BQI6 1058 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 ZHX1Q9UKY1 873 aaPredicted RBP18.12■□□□□ 0.49
GHDC-211ENST00000590520 FAM184BQ9ULE4 1060 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 SLC4A4Q9Y6R1 1079 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 MROH7Q68CQ1 1323 aa18.12■□□□□ 0.49
GHDC-211ENST00000590520 ATP5JP18859 108 aa18.11■□□□□ 0.49
GHDC-211ENST00000590520 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
GHDC-211ENST00000590520 KLHDC9Q8NEP7 349 aa18.11■□□□□ 0.49
GHDC-211ENST00000590520 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
GHDC-211ENST00000590520 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
GHDC-211ENST00000590520 TBX21Q9UL17 535 aa18.11■□□□□ 0.49
GHDC-211ENST00000590520 NCOR1O75376 2440 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 MS4A1P11836 297 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 CST5P28325 142 aaPredicted RBP18.1■□□□□ 0.49
GHDC-211ENST00000590520 GRIN2CQ14957 1233 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 ZSCAN25Q6NSZ9 544 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 CTR9Q6PD62 1173 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 CCDC174Q6PII3 467 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 MAMDC4Q6UXC1 1216 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 ZNF467Q7Z7K2 595 aaPredicted RBP18.1■□□□□ 0.49
GHDC-211ENST00000590520 TIFAQ96CG3 184 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
GHDC-211ENST00000590520 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.1■□□□□ 0.49
GHDC-211ENST00000590520 ELP1O95163 1332 aa18.09■□□□□ 0.49
GHDC-211ENST00000590520 DNAJC25-GNG10A0A024R161 153 aa18.09■□□□□ 0.49
GHDC-211ENST00000590520 DUSP11O75319 330 aaKnown RBP18.09■□□□□ 0.49
GHDC-211ENST00000590520 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
GHDC-211ENST00000590520 TIMP1P01033 207 aa18.09■□□□□ 0.49
GHDC-211ENST00000590520 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.499e-6■■□□□ 12.8
GHDC-211ENST00000590520 TJAP1Q5JTD0 557 aa18.09■□□□□ 0.49
GHDC-211ENST00000590520 CCSAPQ6IQ19 270 aaPredicted RBP18.09■□□□□ 0.49
GHDC-211ENST00000590520 GLT1D1Q96MS3 346 aa18.09■□□□□ 0.49
GHDC-211ENST00000590520 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
GHDC-211ENST00000590520 MYADML2A6NDP7 307 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 NDUFB10O96000 172 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 CHGBP05060 677 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 KCNA10Q16322 511 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.08■□□□□ 0.48
GHDC-211ENST00000590520 SIRT2Q8IXJ6 389 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 USP38Q8NB14 1042 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 PCSK9Q8NBP7 692 aaKnown RBP18.08■□□□□ 0.48
GHDC-211ENST00000590520 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.08■□□□□ 0.484e-6■□□□□ 8
GHDC-211ENST00000590520 ZNF576Q9H609 170 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 SPC25Q9HBM1 224 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 DDX19BQ9UMR2 479 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 LRRC37A2A6NM11 1700 aa18.08■□□□□ 0.48
GHDC-211ENST00000590520 ATP2A1O14983 1001 aa18.07■□□□□ 0.48
GHDC-211ENST00000590520 C6orf222P0C671 652 aaPredicted RBP18.07■□□□□ 0.48
GHDC-211ENST00000590520 RASA1P20936 1047 aa18.07■□□□□ 0.48
GHDC-211ENST00000590520 PUS7LQ9H0K6 701 aaKnown RBP18.07■□□□□ 0.48
GHDC-211ENST00000590520 UPF3AQ9H1J1 476 aaKnown RBP18.07■□□□□ 0.48
GHDC-211ENST00000590520 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.07■□□□□ 0.48
GHDC-211ENST00000590520 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
GHDC-211ENST00000590520 RIPK3Q9Y572 518 aa18.07■□□□□ 0.48
GHDC-211ENST00000590520 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
GHDC-211ENST00000590520 GBF1Q92538 1859 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
GHDC-211ENST00000590520 F5H6K3 240 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 KLRC3Q07444 240 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 ACVR2BQ13705 512 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 SBK1Q52WX2 424 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 PSRC1Q6PGN9 363 aaPredicted RBP18.06■□□□□ 0.48
GHDC-211ENST00000590520 PRPF38AQ8NAV1 312 aaKnown RBP18.06■□□□□ 0.48
GHDC-211ENST00000590520 GAS2L1Q99501 681 aaPredicted RBP18.06■□□□□ 0.48
GHDC-211ENST00000590520 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 MKNK2Q9HBH9 465 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 FBXO40Q9UH90 709 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 CHD9Q3L8U1 2897 aa18.06■□□□□ 0.48
GHDC-211ENST00000590520 ZBED4O75132 1171 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 ASGR1P07306 291 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 CDK7P50613 346 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 GJA9P57773 515 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 CPXCR1Q8N123 301 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 TMEM199Q8N511 208 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 FGD4Q96M96 766 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 PBX4Q9BYU1 374 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 CHD7Q9P2D1 2997 aa18.05■□□□□ 0.48
GHDC-211ENST00000590520 ARVCFO00192 962 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 TLR3O15455 904 aaKnown RBP18.04■□□□□ 0.48
GHDC-211ENST00000590520 ADCY6O43306 1168 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 SLC4A3P48751 1232 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 CCDC144BQ3MJ40 725 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 TMEM240Q5SV17 173 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 RASIP1Q5U651 963 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 GIMAP6Q6P9H5 292 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 CCDC129Q6ZRS4 1044 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 ARMCX2Q7L311 632 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 FAM126BQ8IXS8 530 aa18.04■□□□□ 0.48
GHDC-211ENST00000590520 ANKRD35Q8N283 1001 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms