RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 THSD7BQ9C0I4 1608 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 MYPNQ86TC9 1320 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 K7ELQ4 463 aaPredicted RBP23.16■■□□□ 1.3
TCF3-213ENST00000590436 AOC2O75106 756 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 SMARCA1P28370 1054 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 MAP2K2P36507 400 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 SCRN1Q12765 414 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 COG2Q14746 738 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 NECAB1Q8N987 351 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 PRPF38AQ8NAV1 312 aaKnown RBP23.16■■□□□ 1.3
TCF3-213ENST00000590436 FBXO28Q9NVF7 368 aa23.16■■□□□ 1.3
TCF3-213ENST00000590436 PDHXO00330 501 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 CDKL5O76039 1030 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 PLEKHA8P1O95397 391 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 ADD1P35611 737 aaKnown RBP23.15■■□□□ 1.3
TCF3-213ENST00000590436 SLC16A2P36021 539 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 TM4SF4P48230 202 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 SYDE2Q5VT97 1194 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 FAM43AQ8N2R8 423 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 KIFC2Q96AC6 838 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 ZIC5Q96T25 663 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 PTPN18Q99952 460 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 SPZ1Q9BXG8 430 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 UBA5Q9GZZ9 404 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 ASCC2Q9H1I8 757 aaPredicted RBP23.15■■□□□ 1.3
TCF3-213ENST00000590436 HOXC10Q9NYD6 342 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 PPP1R9AQ9ULJ8 1098 aa23.15■■□□□ 1.3
TCF3-213ENST00000590436 RLFQ13129 1914 aa23.14■■□□□ 1.3
TCF3-213ENST00000590436 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.29
TCF3-213ENST00000590436 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.29
TCF3-213ENST00000590436 BECN1Q14457 450 aa23.14■■□□□ 1.29
TCF3-213ENST00000590436 SAMD1Q6SPF0 538 aaPredicted RBP23.14■■□□□ 1.29
TCF3-213ENST00000590436 IFNL1Q8IU54 200 aa23.14■■□□□ 1.29
TCF3-213ENST00000590436 CCDC83Q8IWF9 413 aa23.14■■□□□ 1.29
TCF3-213ENST00000590436 PRR12Q9ULL5 1215 aa23.14■■□□□ 1.29
TCF3-213ENST00000590436 IFNAR1P17181 557 aa23.13■■□□□ 1.29
TCF3-213ENST00000590436 DSG3P32926 999 aa23.13■■□□□ 1.29
TCF3-213ENST00000590436 SRBD1Q8N5C6 995 aaKnown RBP23.13■■□□□ 1.29
TCF3-213ENST00000590436 PARK7Q99497 189 aaKnown RBP23.13■■□□□ 1.29
TCF3-213ENST00000590436 CPVLQ9H3G5 476 aa23.13■■□□□ 1.29
TCF3-213ENST00000590436 FDX1P10109 184 aa23.12■■□□□ 1.29
TCF3-213ENST00000590436 ADGRF4Q8IZF3 695 aa23.12■■□□□ 1.29
TCF3-213ENST00000590436 CMTR1Q8N1G2 835 aaKnown RBP23.12■■□□□ 1.29
TCF3-213ENST00000590436 GTF3C2Q8WUA4 911 aaPredicted RBP23.12■■□□□ 1.29
TCF3-213ENST00000590436 RIOX1Q9H6W3 641 aa23.12■■□□□ 1.29
TCF3-213ENST00000590436 BAZ2BQ9UIF8 2168 aaKnown RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 CNTNAP5Q8WYK1 1306 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 SPDYE16A6NNV3 312 aaPredicted RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 HERVK_113P62684 666 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 FUT2Q10981 343 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 NTRK3Q16288 839 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 LBX2Q6XYB7 198 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 NBPF11Q86T75 865 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 TRIM22Q8IYM9 498 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 CCDC82Q8N4S0 544 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 SMCR8Q8TEV9 937 aaPredicted RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 ATG4CQ96DT6 458 aa23.11■■□□□ 1.29
TCF3-213ENST00000590436 P2RX7Q99572 595 aaKnown RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 LLPHQ9BRT6 129 aaKnown RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 RBM27Q9P2N5 1060 aaKnown RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 CTDP1Q9Y5B0 961 aaPredicted RBP23.11■■□□□ 1.29
TCF3-213ENST00000590436 CYTH3O43739 400 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 ZBED4O75132 1171 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 AKAP17AQ02040 695 aaKnown RBP23.1■■□□□ 1.29
TCF3-213ENST00000590436 ST3GAL1Q11201 340 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 TAF1CQ15572 869 aaPredicted RBP23.1■■□□□ 1.29
TCF3-213ENST00000590436 MB21D1Q8N884 522 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 RRP36Q96EU6 259 aaKnown RBP23.1■■□□□ 1.29
TCF3-213ENST00000590436 RNF26Q9BY78 433 aaPredicted RBP23.1■■□□□ 1.29
TCF3-213ENST00000590436 JMJD4Q9H9V9 463 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 VAT1LQ9HCJ6 419 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 SEC63Q9UGP8 760 aaKnown RBP23.1■■□□□ 1.29
TCF3-213ENST00000590436 RBM19Q9Y4C8 960 aaKnown RBP23.1■■□□□ 1.29
TCF3-213ENST00000590436 A0A0G2JMZ2 1700 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 MYH6P13533 1939 aa23.1■■□□□ 1.29
TCF3-213ENST00000590436 VWA5AO00534 786 aa23.09■■□□□ 1.29
TCF3-213ENST00000590436 CYP2C8P10632 490 aa23.09■■□□□ 1.29
TCF3-213ENST00000590436 SSRP1Q08945 709 aaKnown RBP23.09■■□□□ 1.29
TCF3-213ENST00000590436 CUL4AQ13619 759 aa23.09■■□□□ 1.29
TCF3-213ENST00000590436 SLC35G1Q2M3R5 365 aa23.09■■□□□ 1.29
TCF3-213ENST00000590436 ADAMTS5Q9UNA0 930 aa23.09■■□□□ 1.29
TCF3-213ENST00000590436 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.29
TCF3-213ENST00000590436 CDC37Q16543 378 aaPredicted RBP23.08■■□□□ 1.29
TCF3-213ENST00000590436 HOMER1Q86YM7 354 aa23.08■■□□□ 1.29
TCF3-213ENST00000590436 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
TCF3-213ENST00000590436 PHKBQ93100 1093 aa23.08■■□□□ 1.29
TCF3-213ENST00000590436 MTMR8Q96EF0 704 aa23.08■■□□□ 1.29
TCF3-213ENST00000590436 SLC26A6Q9BXS9 759 aa23.08■■□□□ 1.29
TCF3-213ENST00000590436 RANBP17Q9H2T7 1088 aaKnown RBP23.08■■□□□ 1.29
TCF3-213ENST00000590436 SLC38A10Q9HBR0 1119 aa23.08■■□□□ 1.29
TCF3-213ENST00000590436 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.08■■□□□ 1.29
TCF3-213ENST00000590436 COL11A1P12107 1806 aaPredicted RBP23.08■■□□□ 1.28
TCF3-213ENST00000590436 STK36Q9NRP7 1315 aa23.08■■□□□ 1.28
TCF3-213ENST00000590436 PTPDC1A2A3K4 754 aa23.07■■□□□ 1.28
TCF3-213ENST00000590436 ZBTB5O15062 677 aa23.07■■□□□ 1.28
TCF3-213ENST00000590436 PRPF3O43395 683 aaKnown RBP23.07■■□□□ 1.28
TCF3-213ENST00000590436 FMNL1O95466 1100 aaPredicted RBP23.07■■□□□ 1.28
TCF3-213ENST00000590436 CTDNEP1O95476 244 aa23.07■■□□□ 1.28
TCF3-213ENST00000590436 PIBF1Q8WXW3 757 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms