RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PICK1Q9NRD5 415 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 MAST3O60307 1309 aa16.93■□□□□ 0.3
CIRBP-228ENST00000590347 KIF3CO14782 793 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
CIRBP-228ENST00000590347 SCTRP47872 440 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 ANTXR2P58335 489 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 TBC1D1Q86TI0 1168 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-228ENST00000590347 CCDC26Q8TAB7 109 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 CSRNP2Q9H175 543 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 HLFQ16534 295 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 KCNV2Q8TDN2 545 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 MYH15Q9Y2K3 1946 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 TRIM49BA6NDI0 452 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 PLEKP08567 350 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-228ENST00000590347 ATP5JP18859 108 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 TUBB4BP68371 445 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 SKOR1P84550 965 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 ODF2Q5BJF6 829 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 CAPRIN2Q6IMN6 1127 aaKnown RBP16.92■□□□□ 0.3
CIRBP-228ENST00000590347 CCDC70Q6NSX1 233 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 RALYLQ86SE5 291 aaKnown RBP16.92■□□□□ 0.3
CIRBP-228ENST00000590347 AGPAT5Q9NUQ2 364 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
CIRBP-228ENST00000590347 DACH1Q9UI36 760 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 CAPN6Q9Y6Q1 641 aa16.92■□□□□ 0.3
CIRBP-228ENST00000590347 MST1RQ04912 1400 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 PSMD14O00487 310 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 MOCS3O95396 460 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 PYGLP06737 847 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 PHKG2P15735 406 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
CIRBP-228ENST00000590347 GUCY2DQ02846 1103 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 ANKRD20A8PQ5CZ79 823 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 BZW1Q7L1Q6 419 aaKnown RBP16.91■□□□□ 0.3
CIRBP-228ENST00000590347 SAAL1Q96ER3 474 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 PCMTD1Q96MG8 357 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-228ENST00000590347 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
CIRBP-228ENST00000590347 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 GLI1P08151 1106 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 CKAP4Q07065 602 aaKnown RBP16.91■□□□□ 0.3
CIRBP-228ENST00000590347 ADCY2Q08462 1091 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 SPATA4Q8NEY3 305 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 PRCCQ92733 491 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-228ENST00000590347 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 EPB41L5Q9HCM4 733 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 LEMD3Q9Y2U8 911 aa16.91■□□□□ 0.3
CIRBP-228ENST00000590347 JCADQ9P266 1359 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 A0A0G2JS52 829 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 FAM170AA1A519 330 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 DIAPH2O60879 1101 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 PPP6R2O75170 966 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 METAP2P50579 478 aaKnown RBP eCLIP16.9■□□□□ 0.3
CIRBP-228ENST00000590347 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 SH3GL3Q99963 347 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
CIRBP-228ENST00000590347 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 ANP32DO95626 131 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-228ENST00000590347 FAM133BQ5BKY9 247 aaKnown RBP16.9■□□□□ 0.3
CIRBP-228ENST00000590347 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 C3orf20Q8ND61 904 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 PAG1Q9NWQ8 432 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 COPB1P53618 953 aaKnown RBP16.9■□□□□ 0.3
CIRBP-228ENST00000590347 USP4Q13107 963 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 TRIM29Q14134 588 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 XAGE3Q8WTP9 111 aa16.9■□□□□ 0.3
CIRBP-228ENST00000590347 CRYBG1Q9Y4K1 1723 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 ATP6V1G2O95670 118 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 PAPD7Q5XG87 772 aaKnown RBP16.89■□□□□ 0.29
CIRBP-228ENST00000590347 TRIM68Q6AZZ1 485 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 CREG2Q8IUH2 290 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 MYD88Q99836 296 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 SLAIN2Q9P270 581 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 DCDC2CA8MYV0 355 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 FAM107AO95990 144 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 SARSP49591 514 aaKnown RBP16.89■□□□□ 0.29
CIRBP-228ENST00000590347 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 C8orf74Q6P047 294 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 MDM1Q8TC05 714 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
CIRBP-228ENST00000590347 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.29
CIRBP-228ENST00000590347 ZNF142P52746 1687 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-228ENST00000590347 A0A1B0GVG6 124 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 ACTN4O43707 911 aaKnown RBP16.88■□□□□ 0.29
CIRBP-228ENST00000590347 FGAP02671 866 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 WDR59Q6PJI9 974 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 UBE3BQ7Z3V4 1068 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms