RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 FBXO28Q9NVF7 368 aa9.03□□□□□ -0.96
NPC1-208ENST00000590301 FBXO40Q9UH90 709 aa9.03□□□□□ -0.96
NPC1-208ENST00000590301 FEM1BQ9UK73 627 aa9.03□□□□□ -0.96
NPC1-208ENST00000590301 SSUH2Q9Y2M2 353 aa9.03□□□□□ -0.96
NPC1-208ENST00000590301 CTDP1Q9Y5B0 961 aaPredicted RBP9.03□□□□□ -0.96
NPC1-208ENST00000590301 PFASO15067 1338 aa9.03□□□□□ -0.96
NPC1-208ENST00000590301 PRDM1O75626 825 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 NT5C2P49902 561 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 ALX1Q15699 326 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.02□□□□□ -0.97
NPC1-208ENST00000590301 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 GMCL1Q96IK5 515 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 SEC62Q99442 399 aaKnown RBP9.02□□□□□ -0.97
NPC1-208ENST00000590301 GDF15Q99988 308 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 ANAPC4Q9UJX5 808 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 RANBP2P49792 3224 aaKnown RBP9.02□□□□□ -0.97
NPC1-208ENST00000590301 CDK5RAP2Q96SN8 1893 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 ZMYM6O95789 1325 aa9.02□□□□□ -0.97
NPC1-208ENST00000590301 MYH1P12882 1939 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 KBTBD13C9JR72 458 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 ORC4O43929 436 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 PLA2G6O60733 806 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 PCP11498 1178 aaKnown RBP9.01□□□□□ -0.97
NPC1-208ENST00000590301 BMP3P12645 472 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 MFAP1P55081 439 aaKnown RBP9.01□□□□□ -0.97
NPC1-208ENST00000590301 TFAP4Q01664 338 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 ZNF792Q3KQV3 632 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 MCMDC2Q4G0Z9 681 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 SNRNP48Q6IEG0 339 aaKnown RBP9.01□□□□□ -0.97
NPC1-208ENST00000590301 ZNF467Q7Z7K2 595 aaPredicted RBP9.01□□□□□ -0.97
NPC1-208ENST00000590301 FAM160B2Q86V87 743 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 STK11IPQ8N1F8 1099 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 TRPV1Q8NER1 839 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 CHURC1Q8WUH1 139 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 NUP88Q99567 741 aaPredicted RBP9.01□□□□□ -0.97
NPC1-208ENST00000590301 TINF2Q9BSI4 451 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 SLC38A10Q9HBR0 1119 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.01□□□□□ -0.97
NPC1-208ENST00000590301 SYNGAP1Q96PV0 1343 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
NPC1-208ENST00000590301 MGAMO43451 1857 aa9□□□□□ -0.97
NPC1-208ENST00000590301 TSPY2A6NKD2 308 aa9□□□□□ -0.97
NPC1-208ENST00000590301 FGRP09769 529 aa9□□□□□ -0.97
NPC1-208ENST00000590301 RARBP10826 455 aa9□□□□□ -0.97
NPC1-208ENST00000590301 SLC1A4P43007 532 aa9□□□□□ -0.97
NPC1-208ENST00000590301 STAT2P52630 851 aa9□□□□□ -0.97
NPC1-208ENST00000590301 LRRC26Q2I0M4 334 aa9□□□□□ -0.97
NPC1-208ENST00000590301 SLFN13Q68D06 897 aa9□□□□□ -0.97
NPC1-208ENST00000590301 GPR153Q6NV75 609 aa9□□□□□ -0.97
NPC1-208ENST00000590301 CHD1LQ86WJ1 897 aa9□□□□□ -0.97
NPC1-208ENST00000590301 CHST13Q8NET6 341 aa9□□□□□ -0.97
NPC1-208ENST00000590301 KIFC2Q96AC6 838 aa9□□□□□ -0.97
NPC1-208ENST00000590301 DDX11Q96FC9 970 aa9□□□□□ -0.97
NPC1-208ENST00000590301 SENP6Q9GZR1 1112 aaPredicted RBP9□□□□□ -0.97
NPC1-208ENST00000590301 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
NPC1-208ENST00000590301 STX8Q9UNK0 236 aa9□□□□□ -0.97
NPC1-208ENST00000590301 MYO5AQ9Y4I1 1855 aaKnown RBP9□□□□□ -0.97
NPC1-208ENST00000590301 A0A0G2JMZ2 1700 aa9□□□□□ -0.97
NPC1-208ENST00000590301 DNAJC25-GNG10A0A024R161 153 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 TMEM232C9JQI7 657 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 HIP1O00291 1037 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 FOXP2O15409 715 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 PGK2P07205 417 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 AKR1A1P14550 325 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 MAGEA10P43363 369 aaPredicted RBP8.99□□□□□ -0.97
NPC1-208ENST00000590301 NOVP48745 357 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 NUCB1Q02818 461 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 GSE1Q14687 1217 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 TKFCQ3LXA3 575 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 FAM47AQ5JRC9 791 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 C1orf53Q5VUE5 145 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 RCSD1Q6JBY9 416 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 MAMDC4Q6UXC1 1216 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 RNF180Q86T96 592 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 LRRC47Q8N1G4 583 aaKnown RBP8.99□□□□□ -0.97
NPC1-208ENST00000590301 STAG1Q8WVM7 1258 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
NPC1-208ENST00000590301 LNPKQ9C0E8 428 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 XPNPEP3Q9NQH7 507 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 PRKAG2Q9UGJ0 569 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 PNMA2Q9UL42 364 aa8.99□□□□□ -0.97
NPC1-208ENST00000590301 ZMYND8Q9ULU4 1186 aaPredicted RBP8.99□□□□□ -0.97
NPC1-208ENST00000590301 TRIOBPQ9H2D6 2365 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 RANBP6O60518 1105 aaKnown RBP8.98□□□□□ -0.97
NPC1-208ENST00000590301 FGAP02671 866 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 IKQ13123 557 aaPredicted RBP8.98□□□□□ -0.97
NPC1-208ENST00000590301 SNX17Q15036 470 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 LRRC41Q15345 812 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 LRIT3Q3SXY7 679 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 CCDC129Q6ZRS4 1044 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 CPXCR1Q8N123 301 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 ANKRD35Q8N283 1001 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 DCAF4Q8WV16 495 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 FAM227BQ96M60 508 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 LBHD1Q9BQE6 289 aaPredicted RBP8.98□□□□□ -0.97
NPC1-208ENST00000590301 TSEN34Q9BSV6 310 aaKnown RBP8.98□□□□□ -0.97
NPC1-208ENST00000590301 RNF41Q9H4P4 317 aaPredicted RBP8.98□□□□□ -0.97
NPC1-208ENST00000590301 RAVER2Q9HCJ3 691 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms