RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 IGKV6D-41A0A0C4DH26 115 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
SAFB2-205ENST00000590000 CLTBP09497 229 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 PTGS1P23219 599 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 SMAD3P84022 425 aaKnown RBP16.99■□□□□ 0.31
SAFB2-205ENST00000590000 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 C16orf59Q7L2K0 433 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
SAFB2-205ENST00000590000 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
SAFB2-205ENST00000590000 KANSL2Q9H9L4 492 aa16.99■□□□□ 0.31
SAFB2-205ENST00000590000 DIS3Q9Y2L1 958 aaKnown RBP16.99■□□□□ 0.31
SAFB2-205ENST00000590000 CTAGE5O15320 804 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 NDUFB10O96000 172 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 RARBP10826 455 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 OSBP2Q969R2 916 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
SAFB2-205ENST00000590000 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
SAFB2-205ENST00000590000 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
SAFB2-205ENST00000590000 MYO9BQ13459 2157 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 GRIN2CQ14957 1233 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 KATNBL1Q9H079 304 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 SH2D4AQ9H788 454 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 SLC5A4Q9NY91 659 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 TACC3Q9Y6A5 838 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 LCTP09848 1927 aa16.97■□□□□ 0.31
SAFB2-205ENST00000590000 LRRC37A2A6NM11 1700 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 F5H6K3 240 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 AKR1A1P14550 325 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 ACLYP53396 1101 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 KLRC3Q07444 240 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 KCTD2Q14681 263 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
SAFB2-205ENST00000590000 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 ANKRD33Q7Z3H0 272 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 SLF1Q9BQI6 1058 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 TBX21Q9UL17 535 aa16.96■□□□□ 0.31
SAFB2-205ENST00000590000 GRXCR1A8MXD5 290 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 M0R2C6 588 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 RAD21O60216 631 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 CDK7P50613 346 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 KCNA10Q16322 511 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 RNF180Q86T96 592 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
SAFB2-205ENST00000590000 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.95■□□□□ 0.34e-14■■□□□ 12.2
SAFB2-205ENST00000590000 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
SAFB2-205ENST00000590000 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 PRDM6Q9NQX0 595 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 NYAP2Q9P242 653 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 CHD7Q9P2D1 2997 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 GBF1Q92538 1859 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 ASTN1O14525 1302 aa16.95■□□□□ 0.3
SAFB2-205ENST00000590000 PRDM1O75626 825 aa16.94■□□□□ 0.3
SAFB2-205ENST00000590000 RAG1P15918 1043 aa16.94■□□□□ 0.3
SAFB2-205ENST00000590000 PBX2P40425 430 aa16.94■□□□□ 0.3
SAFB2-205ENST00000590000 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
SAFB2-205ENST00000590000 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
SAFB2-205ENST00000590000 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.94■□□□□ 0.32e-17■■■□□ 17.3
SAFB2-205ENST00000590000 TMEM39AQ9NV64 488 aa16.94■□□□□ 0.3
SAFB2-205ENST00000590000 ATP2A1O14983 1001 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
SAFB2-205ENST00000590000 CPXCR1Q8N123 301 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 CEP95Q96GE4 821 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 SEC62Q99442 399 aaKnown RBP16.93■□□□□ 0.3
SAFB2-205ENST00000590000 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
SAFB2-205ENST00000590000 STARD7Q9NQZ5 370 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
SAFB2-205ENST00000590000 ARPP21Q9UBL0 812 aaPredicted RBP16.93■□□□□ 0.3
SAFB2-205ENST00000590000 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
SAFB2-205ENST00000590000 REV3LO60673 3130 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 SYNGAP1Q96PV0 1343 aa16.93■□□□□ 0.3
SAFB2-205ENST00000590000 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.92■□□□□ 0.3
SAFB2-205ENST00000590000 MINDY4BA8MYZ0 360 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 FOXP2O15409 715 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 FOSL2P15408 326 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 DNAJB2P25686 324 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 CNTN2Q02246 1040 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 FPGSQ05932 587 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 RASIP1Q5U651 963 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 LRRC47Q8N1G4 583 aaKnown RBP16.92■□□□□ 0.3
SAFB2-205ENST00000590000 VWCEQ96DN2 955 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 TOX2Q96NM4 488 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 UPF3AQ9H1J1 476 aaKnown RBP16.92■□□□□ 0.3
SAFB2-205ENST00000590000 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 ZNF536O15090 1300 aa16.92■□□□□ 0.3
SAFB2-205ENST00000590000 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 TIMP1P01033 207 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 ASGR1P07306 291 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 CST5P28325 142 aaPredicted RBP16.91■□□□□ 0.3
SAFB2-205ENST00000590000 ACVR2BQ13705 512 aa16.91■□□□□ 0.3
SAFB2-205ENST00000590000 CCDC144BQ3MJ40 725 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms