RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 ANKRD33Q7Z3H0 272 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
ACTN4-211ENST00000589528 VTI1AQ96AJ9 217 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 SPC25Q9HBM1 224 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 ZNF214Q9UL59 606 aaPredicted RBP18.29■□□□□ 0.52
ACTN4-211ENST00000589528 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.522e-6■■■■□ 21.2
ACTN4-211ENST00000589528 GRIN2CQ14957 1233 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 KCNA10Q16322 511 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 PANK1Q8TE04 598 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 TIFAQ96CG3 184 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 GAS2L1Q99501 681 aaPredicted RBP18.28■□□□□ 0.52
ACTN4-211ENST00000589528 SLF1Q9BQI6 1058 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 TEX13BQ9BXU2 312 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 ZNF576Q9H609 170 aa18.28■□□□□ 0.52
ACTN4-211ENST00000589528 SPTBN5Q9NRC6 3674 aaKnown RBP18.28■□□□□ 0.52
ACTN4-211ENST00000589528 SMIM22K7EJ46 135 aa18.27■□□□□ 0.52
ACTN4-211ENST00000589528 TIMP1P01033 207 aa18.27■□□□□ 0.52
ACTN4-211ENST00000589528 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
ACTN4-211ENST00000589528 PPIGQ13427 754 aaKnown RBP eCLIP18.27■□□□□ 0.522e-8■■□□□ 11.8
ACTN4-211ENST00000589528 TJAP1Q5JTD0 557 aa18.27■□□□□ 0.52
ACTN4-211ENST00000589528 ARPP21Q9UBL0 812 aaPredicted RBP18.27■□□□□ 0.52
ACTN4-211ENST00000589528 RAB11FIP3O75154 756 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 MS4A1P11836 297 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 UBE3CQ15386 1083 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 CTR9Q6PD62 1173 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
ACTN4-211ENST00000589528 CPXCR1Q8N123 301 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 PCSK9Q8NBP7 692 aaKnown RBP18.26■□□□□ 0.51
ACTN4-211ENST00000589528 REPS2Q8NFH8 660 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
ACTN4-211ENST00000589528 ZBED9Q6R2W3 1325 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 ZBED4O75132 1171 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 DUSP11O75319 330 aaKnown RBP18.25■□□□□ 0.51
ACTN4-211ENST00000589528 ATP5JP18859 108 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 TMEM199Q8N511 208 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 PRPF38AQ8NAV1 312 aaKnown RBP18.25■□□□□ 0.51
ACTN4-211ENST00000589528 PPM1EQ8WY54 764 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
ACTN4-211ENST00000589528 HAUS7Q99871 368 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.25■□□□□ 0.512e-10■■■■□ 25.5
ACTN4-211ENST00000589528 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
ACTN4-211ENST00000589528 TTC28Q96AY4 2481 aa18.25■□□□□ 0.51
ACTN4-211ENST00000589528 ELP1O95163 1332 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 A0A0U1RQG5 324 aaPredicted RBP18.24■□□□□ 0.51
ACTN4-211ENST00000589528 TLR3O15455 904 aaKnown RBP18.24■□□□□ 0.51
ACTN4-211ENST00000589528 SNAI1O95863 264 aaPredicted RBP18.24■□□□□ 0.51
ACTN4-211ENST00000589528 ACVR2BQ13705 512 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 MFSD5Q6N075 450 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 MAMDC4Q6UXC1 1216 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 ANKRD35Q8N283 1001 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 USP38Q8NB14 1042 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 KLHDC9Q8NEP7 349 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 TBX21Q9UL17 535 aa18.24■□□□□ 0.51
ACTN4-211ENST00000589528 MYADML2A6NDP7 307 aa18.23■□□□□ 0.51
ACTN4-211ENST00000589528 ASGR1P07306 291 aa18.23■□□□□ 0.51
ACTN4-211ENST00000589528 CST5P28325 142 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-211ENST00000589528 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
ACTN4-211ENST00000589528 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-211ENST00000589528 KIFC2Q96AC6 838 aa18.23■□□□□ 0.51
ACTN4-211ENST00000589528 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
ACTN4-211ENST00000589528 ABHD16BQ9H3Z7 469 aa18.23■□□□□ 0.51
ACTN4-211ENST00000589528 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-211ENST00000589528 F5H6K3 240 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 TNFRSF10AO00220 468 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 NDUFB10O96000 172 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 CHGBP05060 677 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 CSF2RAP15509 400 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 KLRC3Q07444 240 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 CCSAPQ6IQ19 270 aaPredicted RBP18.22■□□□□ 0.51
ACTN4-211ENST00000589528 PSRC1Q6PGN9 363 aaPredicted RBP18.22■□□□□ 0.51
ACTN4-211ENST00000589528 PUS7LQ9H0K6 701 aaKnown RBP18.22■□□□□ 0.51
ACTN4-211ENST00000589528 RAVER2Q9HCJ3 691 aaKnown RBP18.22■□□□□ 0.51
ACTN4-211ENST00000589528 NYAP2Q9P242 653 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 FBXO40Q9UH90 709 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
ACTN4-211ENST00000589528 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 RIPK3Q9Y572 518 aa18.22■□□□□ 0.51
ACTN4-211ENST00000589528 DNAJC25-GNG10A0A024R161 153 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 MINDY4BA8MYZ0 360 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 ARVCFO00192 962 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
ACTN4-211ENST00000589528 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 PBX4Q9BYU1 374 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 MTIF3Q9H2K0 278 aaKnown RBP18.21■□□□□ 0.51
ACTN4-211ENST00000589528 MSRAQ9UJ68 235 aa18.21■□□□□ 0.51
ACTN4-211ENST00000589528 GBF1Q92538 1859 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 MUC3AQ02505 3323 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 ACRP10323 421 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 RASA1P20936 1047 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 GJA9P57773 515 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms