RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SDSP20132 328 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 NT5C2P49902 561 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 TFAP4Q01664 338 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 KLRC3Q07444 240 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 DPP9Q86TI2 863 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 USP6NLQ92738 828 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 VWA5AO00534 786 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 ORC4O43929 436 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 HOXC6P09630 235 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 HSPD1P10809 573 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 FCER1AP12319 257 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 ADORA2AP29274 412 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 IKQ13123 557 aaPredicted RBP12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 FAM47AQ5JRC9 791 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 MMP19Q99542 508 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 TEX13BQ9BXU2 312 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 FBXO28Q9NVF7 368 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
CLPTM1-211ENST00000589347 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.4
CLPTM1-211ENST00000589347 FOXP2O15409 715 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 MSCO60682 206 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 ZBED4O75132 1171 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 FDX1P10109 184 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 BMP3P12645 472 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 STAT3P40763 770 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 STAT2P52630 851 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 TRIM32Q13049 653 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 KCTD2Q14681 263 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 TMEM132BQ14DG7 1078 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 CCL14Q16627 93 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 RRP12Q5JTH9 1297 aaKnown RBP12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 OLFML2BQ68BL8 750 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 SLFN13Q68D06 897 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 ZNF589Q86UQ0 364 aaPredicted RBP12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 RIOX2Q8IUF8 465 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 MKL1Q969V6 931 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 ADAMTS5Q9UNA0 930 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 PFASO15067 1338 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 RAD50Q92878 1312 aa12.52□□□□□ -0.41
CLPTM1-211ENST00000589347 FGAP02671 866 aa12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 SLC1A4P43007 532 aa12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 TTC22Q5TAA0 569 aa12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 LRRC37A2A6NM11 1700 aa12.51□□□□□ -0.41
CLPTM1-211ENST00000589347 ZNF213O14771 459 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 OAZ1P54368 228 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 HAND2P61296 217 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 MFSD6Q6ZSS7 791 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 NPLOC4Q8TAT6 608 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 CHURC1Q8WUH1 139 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 OGDHLQ9ULD0 1010 aa12.5□□□□□ -0.41
CLPTM1-211ENST00000589347 LCTP09848 1927 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 FGRP09769 529 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 COL6A1P12109 1028 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 CNGA1P29973 690 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 CCND3P30281 292 aaPredicted RBP12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 CCDC96Q2M329 555 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 CCDC178Q5BJE1 867 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 ESR2Q92731 530 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 FLRT1Q9NZU1 646 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
CLPTM1-211ENST00000589347 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 TMEM232C9JQI7 657 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 PLA2G6O60733 806 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 TOP1P11387 765 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 COL9A1P20849 921 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 IMMTQ16891 758 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 IQCA1Q86XH1 822 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms