RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TFAP4Q01664 338 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 NOGQ13253 232 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 NR5A1Q13285 461 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 DIXDC1Q155Q3 683 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 PFKFB3Q16875 520 aaPredicted RBP11.38□□□□□ -0.59
VPS25-202ENST00000589219 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 KANK3Q6NY19 840 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 C16orf86Q6ZW13 317 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 TEX11Q8IYF3 940 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 CMTR1Q8N1G2 835 aaKnown RBP11.38□□□□□ -0.59
VPS25-202ENST00000589219 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 MKNK2Q9HBH9 465 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 CLIP2Q9UDT6 1046 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 KCNH3Q9ULD8 1083 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 MYH6P13533 1939 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 MYH2Q9UKX2 1941 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 FLT1P17948 1338 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 EGFRP00533 1210 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 ZNF280AP59817 542 aaPredicted RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 DPCR1Q3MIW9 517 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 MFSD14BQ5SR56 506 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 GALNT17Q6IS24 598 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 DRC7Q8IY82 874 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 ZNF444Q8N0Y2 327 aaPredicted RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 SPC24Q8NBT2 197 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 PNMA1Q8ND90 353 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 CNNM3Q8NE01 707 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 CCDC148Q8NFR7 591 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 TGFBRAP1Q8WUH2 860 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 CCDC102AQ96A19 550 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 PYM1Q9BRP8 204 aaKnown RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 TTC12Q9H892 705 aaPredicted RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 GBA2Q9HCG7 927 aaPredicted RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 CABP5Q9NP86 173 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
VPS25-202ENST00000589219 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
VPS25-202ENST00000589219 MYO3BQ8WXR4 1341 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 NMT2O60551 498 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 RASA1P20936 1047 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 MMP14P50281 582 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 EVX2Q03828 476 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 GRIK5Q16478 980 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 TTC38Q5R3I4 469 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 MAPKAPK5Q8IW41 473 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 TRIML1Q8N9V2 468 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 DAGLBQ8NCG7 672 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 CLIC6Q96NY7 704 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 GGA3Q9NZ52 723 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
VPS25-202ENST00000589219 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 PTGS1P23219 599 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 GSDMDP57764 484 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 RHBDL3P58872 404 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 NLRP5P59047 1200 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 MYL5Q02045 173 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS25-202ENST00000589219 POSTNQ15063 836 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 NPY5RQ15761 445 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 RGMBQ6NW40 437 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 CCDC186Q7Z3E2 898 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
VPS25-202ENST00000589219 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 KIAA1524Q8TCG1 905 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 DYNLL2Q96FJ2 89 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 GMLQ99445 158 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 IL17RBQ9NRM6 502 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 IMPACTQ9P2X3 320 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
VPS25-202ENST00000589219 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 SMARCA1P28370 1054 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 CDK8P49336 464 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 ZNF157P51786 506 aaPredicted RBP11.34□□□□□ -0.59
VPS25-202ENST00000589219 ATP2C1P98194 919 aaPredicted RBP11.34□□□□□ -0.59
VPS25-202ENST00000589219 CT47A1Q5JQC4 288 aaPredicted RBP11.34□□□□□ -0.59
VPS25-202ENST00000589219 NT5DC1Q5TFE4 455 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
VPS25-202ENST00000589219 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
VPS25-202ENST00000589219 SPZ1Q9BXG8 430 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 DAGLAQ9Y4D2 1042 aa11.34□□□□□ -0.59
VPS25-202ENST00000589219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
VPS25-202ENST00000589219 hCG_1984214I3L0E3 225 aa11.33□□□□□ -0.6
VPS25-202ENST00000589219 BIN1O00499 593 aa11.33□□□□□ -0.6
VPS25-202ENST00000589219 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms