RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 KBTBD13C9JR72 458 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 F5H6K3 240 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 CTAGE5O15320 804 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 GPAA1O43292 621 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 MS4A1P11836 297 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 KLRC3Q07444 240 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 KLHDC9Q8NEP7 349 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 APPBP2Q92624 585 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 KATNBL1Q9H079 304 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 SH2D4AQ9H788 454 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 PRDM5Q9NQX1 630 aaPredicted RBP13.22□□□□□ -0.29
MRPL54-202ENST00000589174 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
MRPL54-202ENST00000589174 PCDHB15Q9Y5E8 787 aa13.22□□□□□ -0.29
MRPL54-202ENST00000589174 ASTN1O14525 1302 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 SYNRGQ9UMZ2 1314 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 A0A1W2PQ45 241 aaPredicted RBP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 A0A1W2PQY0 241 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 MINDY4BA8MYZ0 360 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 RNF113AO15541 343 aaKnown RBP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 LRRC47Q8N1G4 583 aaKnown RBP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 LBHD1Q9BQE6 289 aaPredicted RBP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 SLF1Q9BQI6 1058 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 COL25A1Q9BXS0 654 aaPredicted RBP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
MRPL54-202ENST00000589174 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
MRPL54-202ENST00000589174 GBF1Q92538 1859 aa13.21□□□□□ -0.3
MRPL54-202ENST00000589174 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 ZNF536O15090 1300 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 RAD21O60216 631 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 FAAP100Q0VG06 881 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 SNRNP48Q6IEG0 339 aaKnown RBP13.2□□□□□ -0.3
MRPL54-202ENST00000589174 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 MKL1Q969V6 931 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 NRBP1Q9UHY1 535 aa13.2□□□□□ -0.3
MRPL54-202ENST00000589174 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 RARBP10826 455 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 KCTD2Q14681 263 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
MRPL54-202ENST00000589174 TEX13BQ9BXU2 312 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
MRPL54-202ENST00000589174 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
MRPL54-202ENST00000589174 RBAK-RBAKDNI3L0D1 243 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 CLTBP09497 229 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 AKR1A1P14550 325 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 ACLYP53396 1101 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 CNTN2Q02246 1040 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 C16orf59Q7L2K0 433 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
MRPL54-202ENST00000589174 CUL9Q8IWT3 2517 aa13.18□□□□□ -0.3
MRPL54-202ENST00000589174 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 NMT2O60551 498 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 PQBP1O60828 265 aaKnown RBP13.17□□□□□ -0.3
MRPL54-202ENST00000589174 CDK7P50613 346 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 SNAP25P60880 206 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 KCNA10Q16322 511 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 PRPF38AQ8NAV1 312 aaKnown RBP13.17□□□□□ -0.3
MRPL54-202ENST00000589174 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.17□□□□□ -0.3
MRPL54-202ENST00000589174 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
MRPL54-202ENST00000589174 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
MRPL54-202ENST00000589174 SLC4A3P48751 1232 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 ACVR2BQ13705 512 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
MRPL54-202ENST00000589174 AMOTL1Q8IY63 956 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
MRPL54-202ENST00000589174 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
MRPL54-202ENST00000589174 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
MRPL54-202ENST00000589174 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms