RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 ZKSCAN4Q969J2 545 aaPredicted RBP7.1□□□□□ -1.27
CAPNS1-208ENST00000589162 TBC1D2Q9BYX2 928 aa7.1□□□□□ -1.27
CAPNS1-208ENST00000589162 KRT23Q9C075 422 aa7.1□□□□□ -1.27
CAPNS1-208ENST00000589162 PI4KBQ9UBF8 816 aa7.1□□□□□ -1.27
CAPNS1-208ENST00000589162 TPCN1Q9ULQ1 816 aa7.1□□□□□ -1.27
CAPNS1-208ENST00000589162 PAPPA2Q9BXP8 1791 aa7.1□□□□□ -1.27
CAPNS1-208ENST00000589162 GREB1LQ9C091 1923 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 SRCAPQ6ZRS2 3230 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 TNKSO95271 1327 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 PITPNM2Q9BZ72 1349 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 UBE2Q2LH0YL09 131 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 CAPN5O15484 640 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 USP2O75604 605 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 SLC3A2P08195 630 aaKnown RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 YY1P25490 414 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 PSMA5P28066 241 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 TRDNQ13061 729 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 KRT32Q14532 448 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 RAB3GAP1Q15042 981 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 SEC23AQ15436 765 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 ABCB5Q2M3G0 1257 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 CERKLQ49MI3 558 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 RCSD1Q6JBY9 416 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 SIAH1Q8IUQ4 282 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 ENAHQ8N8S7 591 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 RDH13Q8NBN7 331 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 ACER1Q8TDN7 264 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 IGDCC4Q8TDY8 1250 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 ESR2Q92731 530 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 IL17RAQ96F46 866 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 CEP95Q96GE4 821 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 CLMNQ96JQ2 1002 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 ZSCAN10Q96SZ4 725 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 TM6SF1Q9BZW5 370 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 EHD4Q9H223 541 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 DHX36Q9H2U1 1008 aaKnown RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 RNF41Q9H4P4 317 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 LY9Q9HBG7 655 aa7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 GPBP1L1Q9HC44 474 aaPredicted RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 NCOA5Q9HCD5 579 aaKnown RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 ANGEL1Q9UNK9 670 aaKnown RBP7.09□□□□□ -1.27
CAPNS1-208ENST00000589162 DOCK1Q14185 1865 aa7.09□□□□□ -1.28
CAPNS1-208ENST00000589162 IGKV6D-41A0A0C4DH26 115 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 KLF18A0A0U1RQI7 1052 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 PHF20L1A8MW92 1017 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 RAD21O60216 631 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 MCM5P33992 734 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CAP2P40123 477 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 ECE1P42892 770 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CCT2P78371 535 aaKnown RBP7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 FGD1P98174 961 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 WTAPQ15007 396 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 ME3Q16798 604 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 KIAA1755Q5JYT7 1200 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 TATDN1Q6P1N9 297 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 NFXL1Q6ZNB6 911 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CDC37L1Q7L3B6 337 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 PNMA8AQ86V59 439 aaPredicted RBP7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 LDHDQ86WU2 507 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CCDC83Q8IWF9 413 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CMTR1Q8N1G2 835 aaKnown RBP7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 NEDD1Q8NHV4 660 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 WRNIP1Q96S55 665 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 NUP88Q99567 741 aaPredicted RBP7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 ZNF341Q9BYN7 854 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CPVLQ9H3G5 476 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CNNM2Q9H8M5 875 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 CLIP2Q9UDT6 1046 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 ZBTB21Q9ULJ3 1066 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 STX8Q9UNK0 236 aa7.08□□□□□ -1.28
CAPNS1-208ENST00000589162 MYH4Q9Y623 1939 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 FRMPD2Q68DX3 1309 aaPredicted RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 A0A1W2PRG0 241 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 GOLGA8BA8MQT2 603 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 CELF2O95319 508 aaKnown RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 GOLGA8HP0CJ92 632 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 EEF2P13639 858 aaKnown RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 ANP32AP39687 249 aaKnown RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 GCGRP47871 477 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 MMP14P50281 582 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 METTL16Q86W50 562 aaKnown RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 MICU3Q86XE3 530 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 ZNF784Q8NCA9 323 aaPredicted RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 ZC3H15Q8WU90 426 aaKnown RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 NUP133Q8WUM0 1156 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 KLRG1Q96E93 195 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 TMX3Q96JJ7 454 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 TMEM47Q9BQJ4 181 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 UBAC1Q9BSL1 405 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 ELP3Q9H9T3 547 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 HERC5Q9UII4 1024 aaKnown RBP7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 PPP2R3BQ9Y5P8 575 aa7.07□□□□□ -1.28
CAPNS1-208ENST00000589162 SNCAIPQ9Y6H5 919 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms