RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 ISY1Q9ULR0 285 aaKnown RBP22.7■■□□□ 1.22
CIRBP-221ENST00000589161 TMEM232C9JQI7 657 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 ATP2A1O14983 1001 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 MCCP23508 829 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 OLFML2BQ68BL8 750 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 FAM160B2Q86V87 743 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 ANKLE1Q8NAG6 615 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 MMP19Q99542 508 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 NBPF3Q9H094 633 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 SLC38A10Q9HBR0 1119 aa22.69■■□□□ 1.22
CIRBP-221ENST00000589161 PLA2G6O60733 806 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 COBLO75128 1261 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 STAT2P52630 851 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 KCTD2Q14681 263 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 IMMTQ16891 758 aaKnown RBP22.68■■□□□ 1.22
CIRBP-221ENST00000589161 SNRNP48Q6IEG0 339 aaKnown RBP22.68■■□□□ 1.22
CIRBP-221ENST00000589161 RCSD1Q6JBY9 416 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 TBC1D10CQ8IV04 446 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 ESR2Q92731 530 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 TTC14Q96N46 770 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 HTATIP2Q9BUP3 242 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 MYH4Q9Y623 1939 aa22.68■■□□□ 1.22
CIRBP-221ENST00000589161 RAD50Q92878 1312 aa22.67■■□□□ 1.22
CIRBP-221ENST00000589161 TOP1P11387 765 aaKnown RBP22.67■■□□□ 1.22
CIRBP-221ENST00000589161 CCND3P30281 292 aaPredicted RBP22.67■■□□□ 1.22
CIRBP-221ENST00000589161 OAZ1P54368 228 aa22.67■■□□□ 1.22
CIRBP-221ENST00000589161 IKQ13123 557 aaPredicted RBP22.67■■□□□ 1.22
CIRBP-221ENST00000589161 CPXCR1Q8N123 301 aa22.67■■□□□ 1.22
CIRBP-221ENST00000589161 OGDHLQ9ULD0 1010 aa22.67■■□□□ 1.22
CIRBP-221ENST00000589161 MKI67P46013 3256 aaKnown RBP22.67■■□□□ 1.22
CIRBP-221ENST00000589161 PARP14Q460N5 1801 aa22.66■■□□□ 1.22
CIRBP-221ENST00000589161 IGHA2P01877 340 aa22.66■■□□□ 1.22
CIRBP-221ENST00000589161 CHMLP26374 656 aa22.66■■□□□ 1.22
CIRBP-221ENST00000589161 CYP2C19P33261 490 aa22.66■■□□□ 1.22
CIRBP-221ENST00000589161 DCAF4Q8WV16 495 aa22.66■■□□□ 1.22
CIRBP-221ENST00000589161 TMEM47Q9BQJ4 181 aa22.66■■□□□ 1.22
CIRBP-221ENST00000589161 CCDC178Q5BJE1 867 aa22.65■■□□□ 1.22
CIRBP-221ENST00000589161 KCTD1Q719H9 257 aa22.65■■□□□ 1.22
CIRBP-221ENST00000589161 CENPQQ7L2Z9 268 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-221ENST00000589161 DPF3Q92784 378 aa22.65■■□□□ 1.22
CIRBP-221ENST00000589161 RAVER2Q9HCJ3 691 aaKnown RBP22.65■■□□□ 1.22
CIRBP-221ENST00000589161 DIS3Q9Y2L1 958 aaKnown RBP22.65■■□□□ 1.22
CIRBP-221ENST00000589161 ZNF236Q9UL36 1845 aa22.64■■□□□ 1.22
CIRBP-221ENST00000589161 MSCO60682 206 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 SLC4A3P48751 1232 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 LHX8Q68G74 356 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 NECAB2Q7Z6G3 386 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 CHMP4CQ96CF2 233 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 PAWRQ96IZ0 340 aaKnown RBP22.64■■□□□ 1.21
CIRBP-221ENST00000589161 MAML3Q96JK9 1138 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 FBXO40Q9UH90 709 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 MTMR7Q9Y216 660 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 RIPK3Q9Y572 518 aa22.64■■□□□ 1.21
CIRBP-221ENST00000589161 NEDD4P46934 1319 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 PGK2P07205 417 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 CNGA1P29973 690 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 CCDC96Q2M329 555 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 IQCA1Q86XH1 822 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 DGKHQ86XP1 1220 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 CHST13Q8NET6 341 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 IL25Q9H293 177 aa22.63■■□□□ 1.21
CIRBP-221ENST00000589161 ZNF792Q3KQV3 632 aa22.62■■□□□ 1.21
CIRBP-221ENST00000589161 DDX11Q96FC9 970 aa22.62■■□□□ 1.21
CIRBP-221ENST00000589161 KRT23Q9C075 422 aa22.62■■□□□ 1.21
CIRBP-221ENST00000589161 CNNM2Q9H8M5 875 aa22.62■■□□□ 1.21
CIRBP-221ENST00000589161 DDX20Q9UHI6 824 aaKnown RBP22.62■■□□□ 1.21
CIRBP-221ENST00000589161 COL11A1P12107 1806 aaPredicted RBP22.61■■□□□ 1.21
CIRBP-221ENST00000589161 KDM4AO75164 1064 aa22.61■■□□□ 1.21
CIRBP-221ENST00000589161 CYBAP13498 195 aa22.61■■□□□ 1.21
CIRBP-221ENST00000589161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.61■■□□□ 1.21
CIRBP-221ENST00000589161 NRBP1Q9UHY1 535 aa22.61■■□□□ 1.21
CIRBP-221ENST00000589161 PRR12Q9ULL5 1215 aa22.61■■□□□ 1.21
CIRBP-221ENST00000589161 TKFCQ3LXA3 575 aa22.6■■□□□ 1.21
CIRBP-221ENST00000589161 BTNL9Q6UXG8 535 aa22.6■■□□□ 1.21
CIRBP-221ENST00000589161 ANKRD35Q8N283 1001 aa22.6■■□□□ 1.21
CIRBP-221ENST00000589161 TRPV1Q8NER1 839 aa22.6■■□□□ 1.21
CIRBP-221ENST00000589161 DIS3LQ8TF46 1054 aaKnown RBP22.6■■□□□ 1.21
CIRBP-221ENST00000589161 B4E1Z4 1266 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 SGSM2O43147 1006 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 MNX1P50219 401 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-221ENST00000589161 MSL3Q8N5Y2 521 aaKnown RBP22.59■■□□□ 1.21
CIRBP-221ENST00000589161 ZKSCAN3Q9BRR0 538 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 TINF2Q9BSI4 451 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 C11orf49Q9H6J7 331 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 ZSWIM5Q9P217 1185 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 NR2E3Q9Y5X4 410 aa22.59■■□□□ 1.21
CIRBP-221ENST00000589161 U3KPZ7 1027 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-221ENST00000589161 DNAJC25-GNG10A0A024R161 153 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 SEPT4O43236 478 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 PDHBP11177 359 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 RASGRP2Q7LDG7 609 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 ANKS1AQ92625 1134 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 AGBL1Q96MI9 1066 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 ZSCAN10Q96SZ4 725 aaPredicted RBP22.58■■□□□ 1.21
CIRBP-221ENST00000589161 ACAD9Q9H845 621 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 GPCPD1Q9NPB8 672 aa22.58■■□□□ 1.21
CIRBP-221ENST00000589161 ZNF536O15090 1300 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 PTH1RQ03431 593 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 PRAMEF19Q5SWL8 479 aa22.57■■□□□ 1.2
CIRBP-221ENST00000589161 SYDE2Q5VT97 1194 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms