RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 SYCE3A1L190 88 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 USP17L10C9JJH3 530 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 PDHXO00330 501 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 CPLX1O14810 134 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 GADD45BO75293 160 aaPredicted RBP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 CTDNEP1O95476 244 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 PSEN1P49768 467 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 LBX1P52954 281 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 PDE4BQ07343 736 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 APOBRQ0VD83 1088 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 RRP12Q5JTH9 1297 aaKnown RBP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 GPAT2Q6NUI2 795 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 MFSD6Q6ZSS7 791 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 TMEM179Q6ZVK1 233 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 SIAH1Q8IUQ4 282 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 FAM177A1Q8N128 213 aaPredicted RBP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 LEO1Q8WVC0 666 aaPredicted RBP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 CCDC17Q96LX7 622 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
KDM4B-207ENST00000588961 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 TOMM22Q9NS69 142 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 RTEL1Q9NZ71 1219 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 TAOK2Q9UL54 1235 aa10.06□□□□□ -0.8
KDM4B-207ENST00000588961 LAMA4Q16363 1823 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 SH2B2O14492 632 aaPredicted RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 YEATS4O95619 227 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 TPM3P06753 285 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 HSPA8P11142 646 aaKnown RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 EEF2P13639 858 aaKnown RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 CLCN1P35523 988 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 ADD1P35611 737 aaKnown RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 BACE1P56817 501 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 ANTXR2P58335 489 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 TFAP4Q01664 338 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 SH3D19Q5HYK7 790 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 TREML2Q5T2D2 321 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 ADALQ6DHV7 355 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 FASTKD5Q7L8L6 764 aaKnown RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 ANKRD23Q86SG2 305 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 ELOA2Q8IYF1 753 aaPredicted RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 NKX2-3Q8TAU0 364 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 KCNG4Q8TDN1 519 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
KDM4B-207ENST00000588961 TCEANC2Q96MN5 208 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 FEZ1Q99689 392 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 FUCA2Q9BTY2 467 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 ZNF287Q9HBT7 754 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 TMOD4Q9NZQ9 345 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 HPS5Q9UPZ3 1129 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.83e-6■■■■□ 23.8
KDM4B-207ENST00000588961 MYH8P13535 1937 aa10.05□□□□□ -0.8
KDM4B-207ENST00000588961 KLF18A0A0U1RQI7 1052 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 ERICH2A1L162 156 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 C19orf81C9J6K1 198 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 FIBPO43427 364 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CA12O43570 354 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 NMT2O60551 498 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 ALDH1A1P00352 501 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 TSPY3P0CV98 308 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 TSPY8P0CW00 308 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CALM1P0DP23 149 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CALM2P0DP24 149 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CALM3P0DP25 149 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CYP2C8P10632 490 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 FDPSP14324 419 aaKnown RBP10.04□□□□□ -0.8
KDM4B-207ENST00000588961 ICA1Q05084 483 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 STK3Q13188 491 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CRHR2Q13324 411 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
KDM4B-207ENST00000588961 USP17L2Q6R6M4 530 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 NUP62CLQ9H1M0 184 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 KANSL2Q9H9L4 492 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 CLIP2Q9UDT6 1046 aa10.04□□□□□ -0.8
KDM4B-207ENST00000588961 IGKV6D-41A0A0C4DH26 115 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ESPNB1AK53 854 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ZBTB43O43298 467 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ORC4O43929 436 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 RAD21O60216 631 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 JAK2O60674 1132 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 IFNAR1P17181 557 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 METAP2P50579 478 aaKnown RBP eCLIP10.03□□□□□ -0.8
KDM4B-207ENST00000588961 KIAA1755Q5JYT7 1200 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 APOA5Q6Q788 366 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms